BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029819
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L...   141   5e-32
ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] g...   138   4e-31
ref|XP_002166450.2| PREDICTED: ubiquitin-60S ribosomal protein L...   136   2e-30
ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [S...   135   3e-30
ref|XP_002328216.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
 Frame = +1

Query: 40  MQIFVKSLNSNTISVGVESSDSVEFVKKLIIEETGGAELEEMRLAFCGMELEDECLLSDY 219
           MQIFVK+L   TI++ VESSD+++ VK  I ++ G    ++ RL F G +LED   L+DY
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEG-IPPDQQRLIFAGKQLEDGRTLADY 135

Query: 220 QIHHESTLDAIMRLRGGKGG--PPKIDPNLLVLAQKFNQKRMICRKCYARLDIRAKNCRK 393
            I  ESTL  ++RLRGG  G  P  ++PNL +LAQK+N+ +M+CRKCYARL +RA +CRK
Sbjct: 136 NIQKESTLHLVLRLRGGSRGQYPKNLEPNLRILAQKYNENKMVCRKCYARLPLRATHCRK 195

Query: 394 KKCGHSNQL 420
           KKCGHSNQL
Sbjct: 196 KKCGHSNQL 204



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = +1

Query: 40  MQIFVKSLNSNTISVGVESSDSVEFVKKLIIEETGGAELEEMRLAFCGMELEDECLLSDY 219
           MQIFVK+L   TI++ VES D+++ VK  I ++  G   ++ RL F G +L+D   L+DY
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKI-QDKEGIPPDQQRLIFAGKQLDDGRTLADY 59

Query: 220 QIHHESTLDAIMRLR 264
            I  ESTL  ++RLR
Sbjct: 60  NIQKESTLHLVLRLR 74


>ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group]
           gi|51535937|dbj|BAD38019.1| putative ubiquitin /
           ribosomal protein CEP52 [Oryza sativa Japonica Group]
           gi|113631570|dbj|BAF25251.1| Os09g0452700 [Oryza sativa
           Japonica Group] gi|125563958|gb|EAZ09338.1| hypothetical
           protein OsI_31610 [Oryza sativa Indica Group]
           gi|125605917|gb|EAZ44953.1| hypothetical protein
           OsJ_29596 [Oryza sativa Japonica Group]
          Length = 140

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/129 (54%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
 Frame = +1

Query: 40  MQIFVKSLNSNTISVGVESSDSVEFVKKLIIEETGGAELEEMRLAFCGMELEDECLLSDY 219
           MQIFVK+L   TI++ VESSD+++ VK  I ++  G   ++ RL F G +LED   L+DY
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKI-QDKEGIPPDQQRLIFAGKQLEDGRTLADY 59

Query: 220 QIHHESTLDAIMRLRGG-KGGPPK-IDPNLLVLAQKFNQKRMICRKCYARLDIRAKNCRK 393
            I  ESTL  ++RLRGG +GG PK I+PNL  LAQK+N+ +++CR+CYARL +R+ NCRK
Sbjct: 60  NIQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARLPLRSTNCRK 119

Query: 394 KKCGHSNQL 420
           KKCGHSN++
Sbjct: 120 KKCGHSNEI 128


>ref|XP_002166450.2| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Hydra
           magnipapillata]
          Length = 128

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/127 (56%), Positives = 91/127 (71%)
 Frame = +1

Query: 40  MQIFVKSLNSNTISVGVESSDSVEFVKKLIIEETGGAELEEMRLAFCGMELEDECLLSDY 219
           MQIFVK+L   TI++ VE++D++E VK  I ++  G   ++ RL F G +LED   LSDY
Sbjct: 1   MQIFVKTLTGKTITLEVEAADTIENVKAKI-QDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59

Query: 220 QIHHESTLDAIMRLRGGKGGPPKIDPNLLVLAQKFNQKRMICRKCYARLDIRAKNCRKKK 399
            I  ESTL  ++RLRGG      I+P+L +LAQK+N  +MICRKCYARL IRAKNCRKKK
Sbjct: 60  NIQKESTLHLVLRLRGGV-----IEPSLRILAQKYNCDKMICRKCYARLHIRAKNCRKKK 114

Query: 400 CGHSNQL 420
           CGHSN L
Sbjct: 115 CGHSNNL 121


>ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [Sorghum bicolor]
           gi|241923476|gb|EER96620.1| hypothetical protein
           SORBIDRAFT_02g022750 [Sorghum bicolor]
          Length = 139

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/128 (57%), Positives = 92/128 (71%), Gaps = 3/128 (2%)
 Frame = +1

Query: 40  MQIFVKSLNSNTISVGVESSDSVEFVKKLIIEETGGAELEEMRLAFCGMELEDECLLSDY 219
           MQIFVK+L   T+++ VESSD+V  VK  I ++  G   ++ RL F G +LEDE  L+DY
Sbjct: 1   MQIFVKTLTGKTVTLEVESSDTVANVKAKI-QDKEGIPPDQQRLIFAGKQLEDERTLADY 59

Query: 220 QIHHESTLDAIMRLRGG--KGGP-PKIDPNLLVLAQKFNQKRMICRKCYARLDIRAKNCR 390
            I  ESTL  ++RLRGG  KGG  PKID NLL LA K+ Q +MICRKCYAR  +RA+NCR
Sbjct: 60  NIQKESTLHLVLRLRGGGGKGGSYPKIDLNLLQLALKYRQHKMICRKCYARNSVRAENCR 119

Query: 391 KKKCGHSN 414
           KKKCGH++
Sbjct: 120 KKKCGHTS 127


>ref|XP_002328216.1| predicted protein [Populus trichocarpa] gi|222837731|gb|EEE76096.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/128 (54%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
 Frame = +1

Query: 40  MQIFVKSLNSNTISVGVESSDSVEFVKKLIIEETGGAELEEMRLAFCGMELEDECLLSDY 219
           MQIFVK+L    +++ VESS +V+ VK  I ++  G   E+ RL F G +LED   L+ Y
Sbjct: 1   MQIFVKTLTGKAVTLEVESSYTVDNVKAKI-QDKEGIPPEQQRLIFAGKQLEDSRTLASY 59

Query: 220 QIHHESTLDAIMRLRGGKGGPP-KIDPNLLVLAQKFNQKRMICRKCYARLDIRAKNCRKK 396
            I  ESTL  ++RLRGGKG P  KI+P+L  LA+KFNQ ++ICR+CY+RL  RAKNCRKK
Sbjct: 60  DIQKESTLHLVLRLRGGKGAPSMKIEPSLRELARKFNQYKLICRRCYSRLPPRAKNCRKK 119

Query: 397 KCGHSNQL 420
           KCGHSN++
Sbjct: 120 KCGHSNEV 127