BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029816
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623442.1| F-box protein [Medicago truncatula] gi|35549...    69   6e-10
ref|XP_003623407.1| F-box/kelch-repeat protein [Medicago truncat...    68   1e-09
gb|AAF78503.1|AC012187_23 Contains similarity to an unknown prot...    67   2e-09
ref|NP_172747.1| F-box and associated interaction domains-contai...    67   2e-09
ref|XP_003623446.1| F-box protein [Medicago truncatula] gi|35549...    67   2e-09

>ref|XP_003623442.1| F-box protein [Medicago truncatula] gi|355498457|gb|AES79660.1|
           F-box protein [Medicago truncatula]
          Length = 422

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
 Frame = +2

Query: 137 SNFTDDLWMEIFLRLPLKSLLRFKSVSKSWFSIICSHRFAESHLETAPKDDEILIIFHEL 316
           ++  D+L  EI  RL +K+++RFKSVSKSW ++I    F + HL+ + +   I++I+++ 
Sbjct: 19  TSIPDELMAEILSRLDVKTIVRFKSVSKSWNTLISDPAFVDKHLQKSSQKQNIIVIWND- 77

Query: 317 FDGVHLETSYSLFHLDSWRVLNNLKFPFSQGEYPSFVPIFCKLIGSDCGIVC-------V 475
                    Y++  +   R++ N            ++   C + GS  G++C       +
Sbjct: 78  ------NDGYNVSRIPLHRLIGNPSISIHSHNNSHYLERGCYIAGSCNGLICLFSKYFYI 131

Query: 476 SVNLLEWRAAKKKHDIYLWNPAT 544
           + N+       + + IY WNP+T
Sbjct: 132 TENVGSRHVGHENYSIYFWNPST 154


>ref|XP_003623407.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355498422|gb|AES79625.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 373

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 45/133 (33%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +2

Query: 149 DDLWMEIFLRLPLKSLLRFKSVSKSWFSIICSHRFAESHLETAPKDDEILIIFHELFDGV 328
           +D+ +EIFLRLPLKSLLRF+ +SKS+ S+I +  F + H++ + K+  +L  FH+     
Sbjct: 9   EDIAIEIFLRLPLKSLLRFQCLSKSFESLISNPTFVKYHVQRSQKNTNLLFKFHDY---- 64

Query: 329 HLETSYSLFHLDSWRVLNNLKFPFSQGEYPSFVPIFCKLIGSDCGIVC-VSVNLLEWRAA 505
                Y  F + + + L+ +   F   ++ S +    K++GS  G+VC ++ +  + RA 
Sbjct: 65  -----YRSFSMVNDKSLSTIVEDF---DFGSRLKSKYKVVGSCNGLVCLIAEDFFKHRA- 115

Query: 506 KKKHDIYLWNPAT 544
             K+ + LWNP+T
Sbjct: 116 --KYLVCLWNPST 126


>gb|AAF78503.1|AC012187_23 Contains similarity to an unknown protein F3F19.23 gi|4850403 from
           Arabidopsis thaliana BAC F3F19 gb|AC007357 and contains
           a F-Box PF|00646 domain [Arabidopsis thaliana]
          Length = 556

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
 Frame = +2

Query: 74  IASSLNMDESEKSKITWEMVISNFTDDLWMEIFLRLPLKSLLRFKSVSKSWFSIICSHRF 253
           I SS +  + ++      +  S+  DD+  EIFL+LP+K+L+RFKS+SK W S + S  F
Sbjct: 10  IVSSSSSSQRKRRYKKLMIASSSLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYF 69

Query: 254 AESHLETAPK---DDEILIIFHELFDGVHLETSYSLFHLDSWRVLNNLKFPFSQG-EYPS 421
           ++ HL+ A +   D   ++I  E ++   +E S+    L+S   L++  F F +G  +P 
Sbjct: 70  SQRHLKIAERSHVDHPKVMIITEKWN-PDIEISFRTISLESVSFLSSALFNFPRGFHHPI 128

Query: 422 FVPIFCKLIGSDCGIVCVSVNLLEWRAAKKKHDIYLWNPAT 544
           +    C       GI C+         + K  DIY+ NPAT
Sbjct: 129 YASESCD------GIFCIH--------SPKTQDIYVVNPAT 155


>ref|NP_172747.1| F-box and associated interaction domains-containing protein
           [Arabidopsis thaliana]
           gi|378405168|sp|Q9LPW2.2|FBK2_ARATH RecName:
           Full=Putative F-box/kelch-repeat protein At1g12870
           gi|332190820|gb|AEE28941.1| F-box and associated
           interaction domains-containing protein [Arabidopsis
           thaliana]
          Length = 416

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
 Frame = +2

Query: 74  IASSLNMDESEKSKITWEMVISNFTDDLWMEIFLRLPLKSLLRFKSVSKSWFSIICSHRF 253
           I SS +  + ++      +  S+  DD+  EIFL+LP+K+L+RFKS+SK W S + S  F
Sbjct: 10  IVSSSSSSQRKRRYKKLMIASSSLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYF 69

Query: 254 AESHLETAPK---DDEILIIFHELFDGVHLETSYSLFHLDSWRVLNNLKFPFSQG-EYPS 421
           ++ HL+ A +   D   ++I  E ++   +E S+    L+S   L++  F F +G  +P 
Sbjct: 70  SQRHLKIAERSHVDHPKVMIITEKWN-PDIEISFRTISLESVSFLSSALFNFPRGFHHPI 128

Query: 422 FVPIFCKLIGSDCGIVCVSVNLLEWRAAKKKHDIYLWNPAT 544
           +    C       GI C+         + K  DIY+ NPAT
Sbjct: 129 YASESCD------GIFCIH--------SPKTQDIYVVNPAT 155


>ref|XP_003623446.1| F-box protein [Medicago truncatula] gi|355498461|gb|AES79664.1|
           F-box protein [Medicago truncatula]
          Length = 422

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
 Frame = +2

Query: 119 TWEMVISNFTDDLWMEIFLRLPLKSLLRFKSVSKSWFSIICSHRFAESHLETAPKDDEIL 298
           T  ++ ++  D+L  EI  RL +K+++RFKSVSKSW ++I    F + HL+ + +   ++
Sbjct: 13  TAPLLPTSIPDELVAEILSRLDVKTIVRFKSVSKSWNTLISDPAFVDKHLQKSSQKQNLI 72

Query: 299 IIFHELFDGVHLETSYSLFHLDSWRVLNNLKFPFSQGEYPSFVPIFCKLIGSDCGIVC-- 472
           +I+++          Y++  +   R++ N            ++   C + GS  G++C  
Sbjct: 73  VIWND-------NDGYNVSRIPLHRLIGNPSIGIHSHNNSHYLERGCYIAGSCNGLICLF 125

Query: 473 -----VSVNLLEWRAAKKKHDIYLWNPAT 544
                ++ N+       + + IY WNP+T
Sbjct: 126 SKYFYITENVGSRHVGHENYSIYFWNPST 154