BLASTX nr result

ID: Cnidium21_contig00029812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029812
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301552.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002301552.1| predicted protein [Populus trichocarpa] gi|222843278|gb|EEE80825.1|
           predicted protein [Populus trichocarpa]
          Length = 871

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = -2

Query: 204 MANPPKTSSGYSDVVVPTNTELANPQFETKLTPPFSSSLGPRFLTPPVIQPNQIPSPSVR 25
           MANPP+ S GYS   VP+N + + PQ E    PP +   G     PP +  +QIPSPS +
Sbjct: 1   MANPPQPSLGYSVTAVPSNPDSSTPQPEKNYVPPPTMLPGASRFPPPKLHQDQIPSPSFQ 60

Query: 24  IP---SPNSGI 1
            P   SP +G+
Sbjct: 61  NPRLLSPANGV 71


Top