BLASTX nr result
ID: Cnidium21_contig00029792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00029792 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ... 55 2e-07 gb|AAP45184.2| Beta transducin-like protein, putative [Solanum b... 57 2e-07 ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm... 53 1e-06 ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|2... 53 1e-06 ref|XP_002465540.1| hypothetical protein SORBIDRAFT_01g040800 [S... 53 2e-06 >ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] gi|297737353|emb|CBI26554.3| unnamed protein product [Vitis vinifera] Length = 1135 Score = 55.5 bits (132), Expect(2) = 2e-07 Identities = 26/38 (68%), Positives = 29/38 (76%) Frame = -1 Query: 310 GVAFSKHIAQIYT*SRAEKLTHHLEIDAHIGGVNKIGF 197 GVAFSKHI QIYT + +L HLEIDAHIGGVN + F Sbjct: 423 GVAFSKHIVQIYTYNPTGELRQHLEIDAHIGGVNDVAF 460 Score = 24.3 bits (51), Expect(2) = 2e-07 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 Query: 201 ALANPYKQFCIVTSG 157 A A+P KQ CIVT G Sbjct: 459 AFAHPNKQLCIVTCG 473 >gb|AAP45184.2| Beta transducin-like protein, putative [Solanum bulbocastanum] Length = 610 Score = 56.6 bits (135), Expect(2) = 2e-07 Identities = 28/38 (73%), Positives = 29/38 (76%) Frame = -1 Query: 310 GVAFSKHIAQIYT*SRAEKLTHHLEIDAHIGGVNKIGF 197 GVAFSKHI QIYT S A +L HLEIDAH GGVN I F Sbjct: 423 GVAFSKHIVQIYTYSPAGELRQHLEIDAHAGGVNDIAF 460 Score = 23.1 bits (48), Expect(2) = 2e-07 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = -2 Query: 201 ALANPYKQFCIVTSGVR*EDDSISWA*NIIYLKHAK*FLQHA----*LCNRYKESV 46 A ++P KQ C+VT G DD + + + F H +C YKES+ Sbjct: 459 AFSHPNKQLCVVTCG----DDKTIKVWDAVSGRRQHMFEGHEAPVYSVCPHYKESI 510 >ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis] gi|223540775|gb|EEF42335.1| conserved hypothetical protein [Ricinus communis] Length = 1137 Score = 52.8 bits (125), Expect(2) = 1e-06 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -1 Query: 310 GVAFSKHIAQIYT*SRAEKLTHHLEIDAHIGGVNKIGF 197 GVAFSKHI Q+Y + +L HLEIDAH+GGVN I F Sbjct: 425 GVAFSKHIVQLYAYNPTGELRQHLEIDAHVGGVNDIAF 462 Score = 24.3 bits (51), Expect(2) = 1e-06 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 Query: 201 ALANPYKQFCIVTSG 157 A A+P KQ CIVT G Sbjct: 461 AFAHPNKQLCIVTCG 475 >ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|222839220|gb|EEE77571.1| predicted protein [Populus trichocarpa] Length = 1099 Score = 52.8 bits (125), Expect(2) = 1e-06 Identities = 25/38 (65%), Positives = 28/38 (73%) Frame = -1 Query: 310 GVAFSKHIAQIYT*SRAEKLTHHLEIDAHIGGVNKIGF 197 GVAFSKHI QIYT + + HLEIDAH+GGVN I F Sbjct: 425 GVAFSKHIVQIYTYNPTGEPRQHLEIDAHVGGVNDIAF 462 Score = 24.3 bits (51), Expect(2) = 1e-06 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 Query: 201 ALANPYKQFCIVTSG 157 A A+P KQ CIVT G Sbjct: 461 AFAHPNKQLCIVTCG 475 >ref|XP_002465540.1| hypothetical protein SORBIDRAFT_01g040800 [Sorghum bicolor] gi|241919394|gb|EER92538.1| hypothetical protein SORBIDRAFT_01g040800 [Sorghum bicolor] Length = 1125 Score = 52.8 bits (125), Expect(2) = 2e-06 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -1 Query: 310 GVAFSKHIAQIYT*SRAEKLTHHLEIDAHIGGVNKIGF 197 GVA+S+HI QIY+ + + L HLEIDAHIGGVN I F Sbjct: 428 GVAYSRHIVQIYSYNGGDDLRQHLEIDAHIGGVNDIAF 465 Score = 23.9 bits (50), Expect(2) = 2e-06 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 Query: 201 ALANPYKQFCIVTSG 157 A A+P KQ CI+T G Sbjct: 464 AFAHPNKQLCIITCG 478