BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029778
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB71467.1| Similar to Saccharomyces RAD16 (gb|X78993) [Arabi...    89   3e-16
ref|XP_002320468.1| hypothetical protein POPTRDRAFT_824295 [Popu...    87   2e-15
ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabid...    86   2e-15
ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like...    86   2e-15
ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like...    86   2e-15

>gb|AAB71467.1| Similar to Saccharomyces RAD16 (gb|X78993) [Arabidopsis thaliana]
          Length = 822

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/83 (57%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
 Frame = +3

Query: 6   NTTKAVLALNASYIWALSGTPLQTHVGELYSLIRFLQISLHSYYFCKDCYCRTTVVF--- 176
           NT +AV AL A+Y WALSGTPLQ  VGELYSLIRFLQI  +SYYFCKDC CR    F   
Sbjct: 371 NTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYFCLI 430

Query: 177 ---SLSGATFSSPGSDATFSSPN 236
              +L G+ FS     A  S P+
Sbjct: 431 VNNNLCGSVFSGGVCSAHQSCPH 453


>ref|XP_002320468.1| hypothetical protein POPTRDRAFT_824295 [Populus trichocarpa]
           gi|222861241|gb|EEE98783.1| hypothetical protein
           POPTRDRAFT_824295 [Populus trichocarpa]
          Length = 476

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/53 (75%), Positives = 44/53 (83%)
 Frame = +3

Query: 6   NTTKAVLALNASYIWALSGTPLQTHVGELYSLIRFLQISLHSYYFCKDCYCRT 164
           NT KAV AL++SY WALSGTPLQ  VGELYSL+RFLQI  +SYY CKDC CRT
Sbjct: 408 NTAKAVFALDSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRT 460


>ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
           gi|332189671|gb|AEE27792.1| Helicase protein with
           RING/U-box domain [Arabidopsis thaliana]
          Length = 833

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +3

Query: 6   NTTKAVLALNASYIWALSGTPLQTHVGELYSLIRFLQISLHSYYFCKDCYCR 161
           NT +AV AL A+Y WALSGTPLQ  VGELYSLIRFLQI  +SYYFCKDC CR
Sbjct: 371 NTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQIRPYSYYFCKDCDCR 422


>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 924

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +3

Query: 6   NTTKAVLALNASYIWALSGTPLQTHVGELYSLIRFLQISLHSYYFCKDCYCR 161
           NT KAVLAL ++Y WALSGTPLQ  VGELYSLIRFLQI+ +SYY CKDC CR
Sbjct: 462 NTAKAVLALESTYKWALSGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCR 513


>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 926

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +3

Query: 6   NTTKAVLALNASYIWALSGTPLQTHVGELYSLIRFLQISLHSYYFCKDCYCR 161
           NT KAVLAL ++Y WALSGTPLQ  VGELYSLIRFLQI+ +SYY CKDC CR
Sbjct: 464 NTAKAVLALESTYKWALSGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCR 515