BLASTX nr result

ID: Cnidium21_contig00029742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029742
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529494.1| conserved hypothetical protein [Ricinus comm...    78   6e-13
gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Popu...    77   2e-12
ref|XP_002326568.1| cc-nbs-lrr resistance protein [Populus trich...    77   2e-12
ref|XP_002336270.1| cc-nbs-lrr resistance protein [Populus trich...    75   4e-12
gb|ABF81443.1| NBS-LRR type disease resistance protein [Populus ...    75   4e-12

>ref|XP_002529494.1| conserved hypothetical protein [Ricinus communis]
            gi|223531052|gb|EEF32904.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1115

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -2

Query: 416  LKSVTLIGALEDPSELIFLPDSVMFLRLAWSKLTEDQMTTLGNLSNLIALELH-NLYRGN 240
            L S+ L+G L++P+ +   P ++M L L+ S L ED M  L  L NLI L L    + G 
Sbjct: 960  LSSMHLVGNLKNPNVVSEFPQNLMMLTLSASGLVEDPMQMLAQLPNLINLRLFCGSFTGQ 1019

Query: 239  KIVWGRKAFPSLQILRLDNFFKLEELQVEDGGLPSLKSLHTIGYQNLKRIPARLEHI 69
            K+V   +AFP L++L+L     LEE  +E+G +P LK L     +NL  +P  L+H+
Sbjct: 1020 KMVCTSRAFPKLRVLKLWELDPLEEWNIEEGAMPGLKCLEIRSCRNLGMLPDGLQHV 1076


>gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1997

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/118 (35%), Positives = 69/118 (58%)
 Frame = -2

Query: 416  LKSVTLIGALEDPSELIFLPDSVMFLRLAWSKLTEDQMTTLGNLSNLIALELHNLYRGNK 237
            L+ + L G LE   + I   DS++ L L WS+L ED +  L NL NL+ LE   +Y G  
Sbjct: 751  LQRLYLTGRLERLPDWILSLDSLVKLVLKWSRLREDPLLFLQNLPNLVHLEFIQVYSGEA 810

Query: 236  IVWGRKAFPSLQILRLDNFFKLEELQVEDGGLPSLKSLHTIGYQNLKRIPARLEHIWK 63
            + +  + F  L++L L+   +LE + V+ G LPSL+ L   G + L+++P+ ++H+ K
Sbjct: 811  LHFSNEGFEKLKVLGLNKLERLESITVQKGALPSLQKLVVQGCKLLQKVPSGIKHLAK 868


>ref|XP_002326568.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|105922919|gb|ABF81444.1| NBS-LRR type disease
            resistance protein [Populus trichocarpa]
            gi|222833890|gb|EEE72367.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 974

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/118 (35%), Positives = 69/118 (58%)
 Frame = -2

Query: 416  LKSVTLIGALEDPSELIFLPDSVMFLRLAWSKLTEDQMTTLGNLSNLIALELHNLYRGNK 237
            L+ + L G LE   + I   DS++ L L WS+L ED +  L NL NL+ LE   +Y G  
Sbjct: 751  LQRLYLTGRLERLPDWILSLDSLVKLVLKWSRLREDPLLFLQNLPNLVHLEFIQVYSGEA 810

Query: 236  IVWGRKAFPSLQILRLDNFFKLEELQVEDGGLPSLKSLHTIGYQNLKRIPARLEHIWK 63
            + +  + F  L++L L+   +LE + V+ G LPSL+ L   G + L+++P+ ++H+ K
Sbjct: 811  LHFSNEGFEKLKVLGLNKLERLESITVQKGALPSLQKLVVQGCKLLQKVPSGIKHLAK 868


>ref|XP_002336270.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222833147|gb|EEE71624.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 898

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/117 (35%), Positives = 68/117 (58%)
 Frame = -2

Query: 413  KSVTLIGALEDPSELIFLPDSVMFLRLAWSKLTEDQMTTLGNLSNLIALELHNLYRGNKI 234
            K + L G LE   + I   DS++ L L WS+L ED +  L NL NL+ LE   +Y G  +
Sbjct: 676  KRLYLTGRLERLPDWILSLDSLVKLVLKWSRLREDPLLFLQNLPNLVHLEFTQVYSGEAL 735

Query: 233  VWGRKAFPSLQILRLDNFFKLEELQVEDGGLPSLKSLHTIGYQNLKRIPARLEHIWK 63
             +  + F  L++L L+   +L+ + V+ G LPSL+ L   G + L+++P+ ++H+ K
Sbjct: 736  HFSNEGFEKLKVLGLNKLERLKSITVQKGALPSLQKLVVQGCKLLQKVPSGMKHLAK 792


>gb|ABF81443.1| NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 903

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/117 (35%), Positives = 68/117 (58%)
 Frame = -2

Query: 413  KSVTLIGALEDPSELIFLPDSVMFLRLAWSKLTEDQMTTLGNLSNLIALELHNLYRGNKI 234
            K + L G LE   + I   DS++ L L WS+L ED +  L NL NL+ LE   +Y G  +
Sbjct: 681  KRLYLTGRLERLPDWILSLDSLVKLVLKWSRLREDPLLFLQNLPNLVHLEFTQVYSGEAL 740

Query: 233  VWGRKAFPSLQILRLDNFFKLEELQVEDGGLPSLKSLHTIGYQNLKRIPARLEHIWK 63
             +  + F  L++L L+   +L+ + V+ G LPSL+ L   G + L+++P+ ++H+ K
Sbjct: 741  HFSNEGFEKLKVLGLNKLERLKSITVQKGALPSLQKLVVQGCKLLQKVPSGMKHLAK 797


Top