BLASTX nr result

ID: Cnidium21_contig00029730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029730
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23720.1| unknown [Picea sitchensis]                             242   2e-62
ref|XP_002968288.1| rab family GTPase [Selaginella moellendorffi...   242   3e-62
ref|XP_002531261.1| protein with unknown function [Ricinus commu...   242   3e-62
ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [...   242   3e-62
ref|XP_002871412.1| hypothetical protein ARALYDRAFT_487852 [Arab...   241   4e-62

>gb|ABK23720.1| unknown [Picea sitchensis]
          Length = 207

 Score =  242 bits (618), Expect = 2e-62
 Identities = 121/130 (93%), Positives = 126/130 (96%)
 Frame = +3

Query: 75  MAAVSPLSKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLDDRTVRL 254
           MA VSPL+KYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYL+DRTVRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 255 QLWDTDGQERFRSLIPSYIRDSSVAVVVYDIANRQSFLNTARWIEEVRTERGPDVIIVLV 434
           QLWDT GQERFRSLIPSYIRDSSVAV+V+D+ANRQSFLNTARWIEEVRTERG DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTERGSDVIIVLV 120

Query: 435 GNKTDLVDKR 464
           GNKTDLVDKR
Sbjct: 121 GNKTDLVDKR 130


>ref|XP_002968288.1| rab family GTPase [Selaginella moellendorffii]
           gi|302788640|ref|XP_002976089.1| rab family GTPase
           [Selaginella moellendorffii] gi|300156365|gb|EFJ22994.1|
           rab family GTPase [Selaginella moellendorffii]
           gi|300163932|gb|EFJ30542.1| rab family GTPase
           [Selaginella moellendorffii]
          Length = 209

 Score =  242 bits (617), Expect = 3e-62
 Identities = 121/129 (93%), Positives = 125/129 (96%)
 Frame = +3

Query: 78  AAVSPLSKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLDDRTVRLQ 257
           A VSPL+KYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYL+DRTVRLQ
Sbjct: 6   ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 65

Query: 258 LWDTDGQERFRSLIPSYIRDSSVAVVVYDIANRQSFLNTARWIEEVRTERGPDVIIVLVG 437
           LWDT GQERFRSLIPSYIRDSSVAVVVYD+ANRQSFLNTARW+EEVRTERG DVIIVLVG
Sbjct: 66  LWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTARWVEEVRTERGSDVIIVLVG 125

Query: 438 NKTDLVDKR 464
           NKTDLVDKR
Sbjct: 126 NKTDLVDKR 134


>ref|XP_002531261.1| protein with unknown function [Ricinus communis]
           gi|223529146|gb|EEF31125.1| protein with unknown
           function [Ricinus communis]
          Length = 207

 Score =  242 bits (617), Expect = 3e-62
 Identities = 119/130 (91%), Positives = 126/130 (96%)
 Frame = +3

Query: 75  MAAVSPLSKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLDDRTVRL 254
           MA VSPL+KYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYL+DRTVRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 255 QLWDTDGQERFRSLIPSYIRDSSVAVVVYDIANRQSFLNTARWIEEVRTERGPDVIIVLV 434
           QLWDT GQERFRSLIPSYIRDSSVAV+VYD+ANRQSFLNT++WIEEVRTERG DVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIVVLV 120

Query: 435 GNKTDLVDKR 464
           GNKTDLVDKR
Sbjct: 121 GNKTDLVDKR 130


>ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [Vitis vinifera]
          Length = 207

 Score =  242 bits (617), Expect = 3e-62
 Identities = 119/130 (91%), Positives = 126/130 (96%)
 Frame = +3

Query: 75  MAAVSPLSKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLDDRTVRL 254
           MA VSPL+KYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYL+DRT+RL
Sbjct: 1   MAVVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIRL 60

Query: 255 QLWDTDGQERFRSLIPSYIRDSSVAVVVYDIANRQSFLNTARWIEEVRTERGPDVIIVLV 434
           QLWDT GQERFRSLIPSYIRDSSVAV+VYD+ NRQSFLNT++WIEEVRTERG DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVGNRQSFLNTSKWIEEVRTERGTDVIIVLV 120

Query: 435 GNKTDLVDKR 464
           GNKTDLVDKR
Sbjct: 121 GNKTDLVDKR 130


>ref|XP_002871412.1| hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp.
           lyrata] gi|297317249|gb|EFH47671.1| hypothetical protein
           ARALYDRAFT_487852 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score =  241 bits (616), Expect = 4e-62
 Identities = 119/130 (91%), Positives = 127/130 (97%)
 Frame = +3

Query: 75  MAAVSPLSKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLDDRTVRL 254
           MA+VSPL+KYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYL+DRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 255 QLWDTDGQERFRSLIPSYIRDSSVAVVVYDIANRQSFLNTARWIEEVRTERGPDVIIVLV 434
           QLWDT GQERFRSLIPSYIRDSSVAV+VYD+ANRQSFLNT++WIE+VRTERG DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 435 GNKTDLVDKR 464
           GNKTDLVDKR
Sbjct: 121 GNKTDLVDKR 130


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