BLASTX nr result

ID: Cnidium21_contig00029699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029699
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538198.1| PREDICTED: SNF1-related protein kinase regul...   164   8e-39
gb|ACU22829.1| unknown [Glycine max]                                  159   2e-37
ref|XP_002523686.1| snf1-kinase beta subunit, plants, putative [...   159   2e-37
ref|XP_002328163.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002313527.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36

>ref|XP_003538198.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           beta-3-like [Glycine max]
          Length = 117

 Score =  164 bits (415), Expect = 8e-39
 Identities = 80/118 (67%), Positives = 92/118 (77%)
 Frame = -3

Query: 356 MSNNYGGNQEEPTVAGFEVPRSPDASYNNVYPGNAXXXXXXXXXXPHLQHTLLNHPPGRG 177
           MSN++  N +E TVAGFEVP+SPD+SYNNVYPGN            HLQHTLLN+P  R 
Sbjct: 1   MSNSHSENHDEVTVAGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANR- 59

Query: 176 GDAPTSVPLPQNVVLNHLYLENREAPRSVVALGITHRFRAKYVTVVLYKPVQRNGSTS 3
            D   +VPLPQNV+LNHLY+ENRE+PRSVVALG THRF +KYVTVVLYKPVQR G+TS
Sbjct: 60  -DTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFHSKYVTVVLYKPVQRRGNTS 116


>gb|ACU22829.1| unknown [Glycine max]
          Length = 117

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/118 (65%), Positives = 90/118 (76%)
 Frame = -3

Query: 356 MSNNYGGNQEEPTVAGFEVPRSPDASYNNVYPGNAXXXXXXXXXXPHLQHTLLNHPPGRG 177
           MSN++  N +E TV GFEVP+SPD+SYNNVYPGN            HLQHTLLN+P  R 
Sbjct: 1   MSNSHSENHDEATVVGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANR- 59

Query: 176 GDAPTSVPLPQNVVLNHLYLENREAPRSVVALGITHRFRAKYVTVVLYKPVQRNGSTS 3
            D   +VPLP+NV+LNHLY+ENRE+PR VV LG THRFR+KYVTVVLYKPVQR G+TS
Sbjct: 60  -DTAGTVPLPKNVILNHLYIENRESPRFVVGLGFTHRFRSKYVTVVLYKPVQRRGNTS 116


>ref|XP_002523686.1| snf1-kinase beta subunit, plants, putative [Ricinus communis]
           gi|223536990|gb|EEF38626.1| snf1-kinase beta subunit,
           plants, putative [Ricinus communis]
          Length = 117

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/118 (66%), Positives = 90/118 (76%)
 Frame = -3

Query: 356 MSNNYGGNQEEPTVAGFEVPRSPDASYNNVYPGNAXXXXXXXXXXPHLQHTLLNHPPGRG 177
           MSN YG + E+ TV GFEVP+SPD+SYNN YPGN           PHLQHTLL++P    
Sbjct: 1   MSNQYGEDHEDTTVVGFEVPKSPDSSYNNAYPGNEDDARDPPAVPPHLQHTLLSYPAS-- 58

Query: 176 GDAPTSVPLPQNVVLNHLYLENREAPRSVVALGITHRFRAKYVTVVLYKPVQRNGSTS 3
            D   ++P PQNV+LNHLY+ENREAPRSVVALG THRFR+KYVTVVLYKPVQR GS+S
Sbjct: 59  ADTSETIPEPQNVILNHLYIENREAPRSVVALGFTHRFRSKYVTVVLYKPVQRRGSSS 116


>ref|XP_002328163.1| predicted protein [Populus trichocarpa] gi|222837678|gb|EEE76043.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  156 bits (395), Expect = 2e-36
 Identities = 77/118 (65%), Positives = 88/118 (74%)
 Frame = -3

Query: 356 MSNNYGGNQEEPTVAGFEVPRSPDASYNNVYPGNAXXXXXXXXXXPHLQHTLLNHPPGRG 177
           MSN Y  +  E TV GFEVPRSPD+SYNNVYPGN            HLQH+LL++P    
Sbjct: 1   MSNQYSEDHGEATVVGFEVPRSPDSSYNNVYPGNEDEVRDPPSVPQHLQHSLLSYPVS-- 58

Query: 176 GDAPTSVPLPQNVVLNHLYLENREAPRSVVALGITHRFRAKYVTVVLYKPVQRNGSTS 3
            D   ++PLPQNV+LNHLY+ENREAPRSVVALG THRF +K+VTVVLYKPVQR GSTS
Sbjct: 59  ADTSETLPLPQNVILNHLYIENREAPRSVVALGFTHRFHSKFVTVVLYKPVQRRGSTS 116


>ref|XP_002313527.1| predicted protein [Populus trichocarpa] gi|222849935|gb|EEE87482.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  155 bits (393), Expect = 3e-36
 Identities = 76/118 (64%), Positives = 90/118 (76%)
 Frame = -3

Query: 356 MSNNYGGNQEEPTVAGFEVPRSPDASYNNVYPGNAXXXXXXXXXXPHLQHTLLNHPPGRG 177
           MSN +  + E+ TVAGFEVPRSPD+SYNN YPGN           PHLQH+LL++P    
Sbjct: 1   MSNQFSEDNEDATVAGFEVPRSPDSSYNNAYPGNEDEVRDPPSVPPHLQHSLLSYPAS-- 58

Query: 176 GDAPTSVPLPQNVVLNHLYLENREAPRSVVALGITHRFRAKYVTVVLYKPVQRNGSTS 3
            D+  ++PLPQNV+LNHLY+ENRE PRSVVALG THRF +K+VTVVLYKPVQR GSTS
Sbjct: 59  ADSSETLPLPQNVILNHLYIENRETPRSVVALGFTHRFHSKFVTVVLYKPVQRRGSTS 116


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