BLASTX nr result

ID: Cnidium21_contig00029696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029696
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   240   1e-61
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              240   1e-61
ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]   223   3e-56
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...   219   4e-55

>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Vitis vinifera]
          Length = 882

 Score =  240 bits (613), Expect = 1e-61
 Identities = 106/148 (71%), Positives = 128/148 (86%)
 Frame = -3

Query: 602  EMIKEKMKEKGFHKLPVRSWIFHQNRAHYFFARDKLHPQYKDINKGLEILVLECLKAGYV 423
            +M++E+M+ KGF K P RSWI H+N+ H F+ARDK HPQ KDI+ GLE+L++ECLKAGYV
Sbjct: 733  DMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYV 792

Query: 422  PDTSFVLHEVEEYQKKDFLFYHSAKLAVTYGLLMTEPEKTICVMKNVILCGDCHTFFKYV 243
            PDTSFVLHEVEE+QKKDFLFYHSAK+A TYGLLMT P + I ++KN++LCGDCHTF KYV
Sbjct: 793  PDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYV 852

Query: 242  SVVTKREIHVRDSSGFHCFWNGQCSCKD 159
            S+VT REI +RD+SG HCF NGQCSCKD
Sbjct: 853  SIVTGREIFLRDASGHHCFLNGQCSCKD 880


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  240 bits (613), Expect = 1e-61
 Identities = 106/148 (71%), Positives = 128/148 (86%)
 Frame = -3

Query: 602  EMIKEKMKEKGFHKLPVRSWIFHQNRAHYFFARDKLHPQYKDINKGLEILVLECLKAGYV 423
            +M++E+M+ KGF K P RSWI H+N+ H F+ARDK HPQ KDI+ GLE+L++ECLKAGYV
Sbjct: 751  DMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYV 810

Query: 422  PDTSFVLHEVEEYQKKDFLFYHSAKLAVTYGLLMTEPEKTICVMKNVILCGDCHTFFKYV 243
            PDTSFVLHEVEE+QKKDFLFYHSAK+A TYGLLMT P + I ++KN++LCGDCHTF KYV
Sbjct: 811  PDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYV 870

Query: 242  SVVTKREIHVRDSSGFHCFWNGQCSCKD 159
            S+VT REI +RD+SG HCF NGQCSCKD
Sbjct: 871  SIVTGREIFLRDASGHHCFLNGQCSCKD 898


>ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Glycine max]
          Length = 874

 Score =  223 bits (569), Expect = 2e-56
 Identities = 100/148 (67%), Positives = 122/148 (82%)
 Frame = -3

Query: 602  EMIKEKMKEKGFHKLPVRSWIFHQNRAHYFFARDKLHPQYKDINKGLEILVLECLKAGYV 423
            EM++E M+EKGF K P +SWI  + + + F+ RD+ HPQ KDI +GLEIL+LECLK GY 
Sbjct: 725  EMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYE 784

Query: 422  PDTSFVLHEVEEYQKKDFLFYHSAKLAVTYGLLMTEPEKTICVMKNVILCGDCHTFFKYV 243
            PDTSFVLHEVEE+ KK FLF+HSAKLA TYG+LMT+P K I ++KN++LCGDCH F KY 
Sbjct: 785  PDTSFVLHEVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYA 844

Query: 242  SVVTKREIHVRDSSGFHCFWNGQCSCKD 159
            S+VTKR+I +RDSSGFHCF NGQCSCKD
Sbjct: 845  SIVTKRDIFLRDSSGFHCFSNGQCSCKD 872


>emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]
          Length = 755

 Score =  223 bits (567), Expect = 3e-56
 Identities = 98/131 (74%), Positives = 115/131 (87%)
 Frame = -3

Query: 551  RSWIFHQNRAHYFFARDKLHPQYKDINKGLEILVLECLKAGYVPDTSFVLHEVEEYQKKD 372
            RSWI H+N+ H F+ARDK HPQ KDI+ GLE+L++ECLKAGYVPDTSFVLHEVEE+QKKD
Sbjct: 623  RSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKD 682

Query: 371  FLFYHSAKLAVTYGLLMTEPEKTICVMKNVILCGDCHTFFKYVSVVTKREIHVRDSSGFH 192
            FLFYHSAK+A TYGLLMT P + I ++KN++LCGDCHTF KYVS+VT REI +RD+SG H
Sbjct: 683  FLFYHSAKIAATYGLLMTRPGRXIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHH 742

Query: 191  CFWNGQCSCKD 159
            CF NGQCSCKD
Sbjct: 743  CFLNGQCSCKD 753


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Cucumis sativus]
          Length = 908

 Score =  219 bits (557), Expect = 4e-55
 Identities = 100/148 (67%), Positives = 121/148 (81%)
 Frame = -3

Query: 602  EMIKEKMKEKGFHKLPVRSWIFHQNRAHYFFARDKLHPQYKDINKGLEILVLECLKAGYV 423
            E ++E M+EKGF K P +SWI H+N+ H F+ARD+ HPQ KDI  GLEIL+LECLK GYV
Sbjct: 759  EKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYV 818

Query: 422  PDTSFVLHEVEEYQKKDFLFYHSAKLAVTYGLLMTEPEKTICVMKNVILCGDCHTFFKYV 243
            PDTSFVL EVEE QKK+FLFYHS KLA T+G+LMT+P K I ++KNV LCGDCH F KYV
Sbjct: 819  PDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYV 878

Query: 242  SVVTKREIHVRDSSGFHCFWNGQCSCKD 159
            S+VT+R+I +RD+SGFH F +GQCSC D
Sbjct: 879  SIVTRRKILLRDTSGFHWFIDGQCSCTD 906


Top