BLASTX nr result

ID: Cnidium21_contig00029692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029692
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-li...    74   1e-11
emb|CBI25044.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002520944.1| nucleic acid binding protein, putative [Rici...    64   2e-08
ref|XP_002306797.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002302090.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 456

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 62/156 (39%), Positives = 76/156 (48%), Gaps = 24/156 (15%)
 Frame = +3

Query: 15  LQVPS--SPLLFYHDP---------GFMTSSFRQ-----PPSSAHLSATALLQKAATVGA 146
           LQ+PS  SP  F   P           MTS F+       P+SAHLSATALLQKAATVGA
Sbjct: 282 LQIPSPISPQFFQEQPPPPPPTQQKNLMTSPFQNFHVSTQPTSAHLSATALLQKAATVGA 341

Query: 147 HS----PGEVPSTMSTMDIGCMXXXXXXXXXXXXXCMSPEYL----GNYATMQQRSEGLT 302
            +     G   S MS + +  +              +SPEYL    GN +T  Q+S+ LT
Sbjct: 342 TANISFTGSSQSHMSRLHMAELGSFPHVGAG-----ISPEYLGFASGNLSTW-QKSDRLT 395

Query: 303 RDFLGLTGGERGDQRGXXXXXXXXXXXLRNLLSYTG 410
           RDFLGLTG   G   G           +R++L YTG
Sbjct: 396 RDFLGLTGESGGGSGGGADGAVNVSVNMRDMLQYTG 431


>emb|CBI25044.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 61/156 (39%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
 Frame = +3

Query: 15  LQVPS--SPLLFYHDP---------GFMTSSFRQ-----PPSSAHLSATALLQKAATVGA 146
           LQ+PS  SP  F   P           MTS F+       P+SAHLSATALLQKAATVGA
Sbjct: 215 LQIPSPISPQFFQEQPPPPPPTQQKNLMTSPFQNFHVSTQPTSAHLSATALLQKAATVGA 274

Query: 147 HS----PGEVPSTMSTMDIGCMXXXXXXXXXXXXXCMSPEYL----GNYATMQQRSEGLT 302
            +     G   S MS + +  +              +SPEYL    GN +T  Q+S+ LT
Sbjct: 275 TANISFTGSSQSHMSRLHMAELGSFPHVGAG-----ISPEYLGFASGNLSTW-QKSDRLT 328

Query: 303 RDFLGLTGGERGDQRGXXXXXXXXXXXLRNLLSYTG 410
           RDFLGLTG   G               +R++L YTG
Sbjct: 329 RDFLGLTGESGGS--------VNVSVNMRDMLQYTG 356


>ref|XP_002520944.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223539781|gb|EEF41361.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 466

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/106 (37%), Positives = 50/106 (47%)
 Frame = +3

Query: 90  SSAHLSATALLQKAATVGAHSPGEVPSTMSTMDIGCMXXXXXXXXXXXXXCMSPEYLGNY 269
           SS HLSATALLQKAATVGA       S M+ +DIG +                  Y+G  
Sbjct: 324 SSHHLSATALLQKAATVGATQTAAGHSQMTRLDIGELVAVSQAADSARQQQQQAAYMGGN 383

Query: 270 ATMQQRSEGLTRDFLGLTGGERGDQRGXXXXXXXXXXXLRNLLSYT 407
               Q+++ LTRDFLGLTG                   +R +L+YT
Sbjct: 384 LATWQKNDRLTRDFLGLTGDHSSGNVANGSGGVSVSMNVREMLTYT 429


>ref|XP_002306797.1| predicted protein [Populus trichocarpa] gi|222856246|gb|EEE93793.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 50/146 (34%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
 Frame = +3

Query: 15  LQVPSSPLLFYHDPGFMTSSFRQ-------PPSSAHLSATALLQKAATVGAHSPGEVPST 173
           LQ P  P L  H  G + S+F           +S HLSATALLQKAA+VGA       S 
Sbjct: 288 LQEPPPPALPSHK-GLLASTFHSLSNAVTSSAASHHLSATALLQKAASVGAAQTSVGHSQ 346

Query: 174 MSTMDIGCM-XXXXXXXXXXXXXCMSPEYLGNYATMQQRSEGLTRDFLGLTG------GE 332
           M+ +D+G +                 P Y  N     Q+S+ LTRDFLGLTG      G 
Sbjct: 347 MTQLDMGELGSAGQVHVNSASHVAQGPNYNLNSLATWQKSDRLTRDFLGLTGECEDHHGH 406

Query: 333 RGDQRGXXXXXXXXXXXLRNLLSYTG 410
                            +R +L+YTG
Sbjct: 407 AASNSNGSSGGVNASMNVREILTYTG 432


>ref|XP_002302090.1| predicted protein [Populus trichocarpa] gi|222843816|gb|EEE81363.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
 Frame = +3

Query: 90  SSAHLSATALLQKAATVGAHSPGEVPSTMSTMDIGCM-XXXXXXXXXXXXXCMSPEYLGN 266
           +S HLSATALLQKAA+VGA       S M+ +D+G +                 P Y  N
Sbjct: 24  ASHHLSATALLQKAASVGATQTSVGHSHMTQLDMGELGSAGQVHVDSVSHVSQGPSYNLN 83

Query: 267 YATMQQRSEGLTRDFLGLTGGERGDQRG----XXXXXXXXXXXLRNLLSYTG 410
                Q+S+ LTRDFLGLT  E GD  G               +R +L+YTG
Sbjct: 84  SLATWQKSDRLTRDFLGLTAPECGDHHGHAASNANGSVNVSMNVREILTYTG 135


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