BLASTX nr result

ID: Cnidium21_contig00029655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029655
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320022.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267...    68   1e-09
emb|CBI19378.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002320023.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002888216.1| hypothetical protein ARALYDRAFT_475391 [Arab...    62   7e-08

>ref|XP_002320022.1| predicted protein [Populus trichocarpa] gi|222860795|gb|EEE98337.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +2

Query: 74  NQNKFMRIITLPIRFLKKGRDLYVKSMMDVAQKPRYGXXXXXXXXXXXXXXXXXXXXXXX 253
           NQ+KFMR+IT+P+R L K RD+YVKSM D +   RYG                       
Sbjct: 7   NQSKFMRVITIPLRVLCKARDVYVKSMTDCSMGMRYG---------PSIVSRAGQHPPLP 57

Query: 254 TSFTPSWA-SNLEGDDLRELIRANSTAYNNDPTNKLRMDMELYIQQLIKDQQVQKLKESL 430
            SF+ S + S+ +G+D REL+RA ++A +   +N++ M M+L  QQ          + S+
Sbjct: 58  RSFSVSSSRSDHDGEDYRELVRA-ASARSLGHSNEIEMYMQLLRQQ----------QSSM 106

Query: 431 MSGNNKFSSSKEVVPRSCSVGM 496
           M+G      SK+V+P+SCSVGM
Sbjct: 107 MTG------SKKVLPKSCSVGM 122


>ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]
          Length = 149

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 61/185 (32%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
 Frame = +2

Query: 74  NQNKFMRIITLPIRFLKKGRDLYVKSMMDVAQKPRYGXXXXXXXXXXXXXXXXXXXXXXX 253
           NQN+FMRIITLPIR L K +DLYV+ M + A +  YG                       
Sbjct: 7   NQNRFMRIITLPIRVLGKAKDLYVRGMTNCATR-GYG-------------NNMGGPAGMP 52

Query: 254 TSFTPSWASNLEGDDLRELIRANSTAYNNDPTNKLRMDMELYIQQLIKDQQVQKLKESLM 433
            S++ + + + + +D REL+RA S        N L   ++L    L++    +K K    
Sbjct: 53  RSYSYASSRSNDNEDFRELVRAAS-------VNTLGHGVDL--NALLQQSAAEKSK---- 99

Query: 434 SGNNKFSSSKEVVPRSCSVGMRKIDXXXXXXXXXXXXXXXXXGRGNVK-KNEVKFPRSRS 610
                      VVPRSCSVGM +ID                 G  N K K ++ +PRSRS
Sbjct: 100 -----------VVPRSCSVGMARID---------EDGPCNDFGEVNFKAKADLMYPRSRS 139

Query: 611 HAVTQ 625
           +AVT+
Sbjct: 140 YAVTK 144


>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 54/183 (29%), Positives = 80/183 (43%)
 Frame = +2

Query: 74  NQNKFMRIITLPIRFLKKGRDLYVKSMMDVAQKPRYGXXXXXXXXXXXXXXXXXXXXXXX 253
           +QN+FMRIIT+PIR L K RD YV+S+ D A++   G                       
Sbjct: 7   SQNRFMRIITIPIRVLSKARDFYVRSLTDAAERVSRG---------NAMGCPGVHISTLP 57

Query: 254 TSFTPSWASNLEGDDLRELIRANSTAYNNDPTNKLRMDMELYIQQLIKDQQVQKLKESLM 433
            SF+ S + + +G+D+  L R+ S + +++     R+DM +++Q                
Sbjct: 58  KSFSVSSSRSGDGEDVGSLSRSGSASSSSN-----RVDMNVFLQPP-------------- 98

Query: 434 SGNNKFSSSKEVVPRSCSVGMRKIDXXXXXXXXXXXXXXXXXGRGNVKKNEVKFPRSRSH 613
                        PRSCSVGM +ID                    NVK  +  +PRSRS+
Sbjct: 99  ------KMGSRAAPRSCSVGMGRIDEDRPCDFEEDSF--------NVKA-DFLYPRSRSY 143

Query: 614 AVT 622
           AVT
Sbjct: 144 AVT 146


>ref|XP_002320023.1| predicted protein [Populus trichocarpa] gi|222860796|gb|EEE98338.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
 Frame = +2

Query: 74  NQNKFMRIITLPIRFLKKGRDLYVKSMMDVAQKPRYGXXXXXXXXXXXXXXXXXXXXXXX 253
           NQ+KFMR++T+P+R L K RD+YVKSM D + +   G                       
Sbjct: 7   NQSKFMRVMTIPVRVLCKARDVYVKSMTDFSMRMSNG---------PSMALLAGQHPPLP 57

Query: 254 TSFTPSWASNLEGDDLRELIR---ANSTAYNNDPTNKLRMDMELYIQQLIKDQQVQKLKE 424
            SF+   + + +G+D R+L+R   A S  ++N        ++E+Y+QQL + Q    +  
Sbjct: 58  KSFSVGSSRSDDGEDHRQLVRAASARSLGHSN--------EIEMYMQQLRQQQSSMTM-- 107

Query: 425 SLMSGNNKFSSSKEVVPRSCSVGMR 499
                      SK+V+P+S SVGMR
Sbjct: 108 ----------GSKKVLPKSSSVGMR 122


>ref|XP_002888216.1| hypothetical protein ARALYDRAFT_475391 [Arabidopsis lyrata subsp.
           lyrata] gi|297334057|gb|EFH64475.1| hypothetical protein
           ARALYDRAFT_475391 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
 Frame = +2

Query: 56  MGRGKGNQNKFMRIITLPIRFLKKGRDLYVKSMMDVAQKPRYGXXXXXXXXXXXXXXXXX 235
           MG+    QNKF+RI+T+P++ L K RDLY++S+   A +  Y                  
Sbjct: 1   MGKRGQKQNKFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTS 60

Query: 236 XXXXXXTSFTPSWASNLEGDDLRELIRANSTAYNNDPTNKLRMDMELYIQQLIKDQQVQK 415
                  S     +     DD  EL+RA S           + ++++ I Q ++ QQ Q+
Sbjct: 61  SAFSSSASSRRRSSDFTFDDDYSELLRAASARSLGH-----KNEIDMIIHQQLQLQQQQQ 115

Query: 416 LKESLMSGNNKFSSSKEVVPRSCSVG--MRKIDXXXXXXXXXXXXXXXXXGRGNVKKNEV 589
            +E+ ++      + K  +P+S SVG  M +ID                  +   K ++ 
Sbjct: 116 RQENRVAMGAVAVAVKGGLPKSSSVGMTMARIDEEDEEEGSL---------KNQKKGSDF 166

Query: 590 KFPRSRSHAVT 622
            +PRSRSHAVT
Sbjct: 167 LYPRSRSHAVT 177


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