BLASTX nr result

ID: Cnidium21_contig00029614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029614
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21094.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002285383.1| PREDICTED: 60S ribosomal protein L39-3-like ...    96   2e-18
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co...    96   2e-18
emb|CBI25619.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CBI25617.3| unnamed protein product [Vitis vinifera]               95   5e-18

>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/84 (60%), Positives = 53/84 (63%)
 Frame = +1

Query: 31  TTGTMPSHKTFIIKKKLARKMRQNRPIPHWIRMRTDNTIRXXXXXXXXXXXXXXXXXXXX 210
           +T  MPSHKTFIIKKKLA+KMRQNRPIPHWIRMRTDNTI                     
Sbjct: 58  STAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTI--------------------- 96

Query: 211 XXXXXXXXRYNAKRRHWRRTKLGF 282
                   RYNAKRRHWRRTKLGF
Sbjct: 97  --------RYNAKRRHWRRTKLGF 112


>ref|XP_002285383.1| PREDICTED: 60S ribosomal protein L39-3-like [Vitis vinifera]
          Length = 51

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/80 (62%), Positives = 51/80 (63%)
 Frame = +1

Query: 43  MPSHKTFIIKKKLARKMRQNRPIPHWIRMRTDNTIRXXXXXXXXXXXXXXXXXXXXXXXX 222
           MPSHKTFIIKKKLA+KMRQNRPIPHWIRMRTDNTI                         
Sbjct: 1   MPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTI------------------------- 35

Query: 223 XXXXRYNAKRRHWRRTKLGF 282
               RYNAKRRHWRRTKLGF
Sbjct: 36  ----RYNAKRRHWRRTKLGF 51


>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
           gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
           putative [Ricinus communis]
          Length = 67

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/80 (62%), Positives = 51/80 (63%)
 Frame = +1

Query: 43  MPSHKTFIIKKKLARKMRQNRPIPHWIRMRTDNTIRXXXXXXXXXXXXXXXXXXXXXXXX 222
           MPSHKTFIIKKKLA+KMRQNRPIPHWIRMRTDNTI                         
Sbjct: 17  MPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTI------------------------- 51

Query: 223 XXXXRYNAKRRHWRRTKLGF 282
               RYNAKRRHWRRTKLGF
Sbjct: 52  ----RYNAKRRHWRRTKLGF 67


>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
          Length = 72

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/80 (61%), Positives = 51/80 (63%)
 Frame = +1

Query: 43  MPSHKTFIIKKKLARKMRQNRPIPHWIRMRTDNTIRXXXXXXXXXXXXXXXXXXXXXXXX 222
           MPSHKTF+IKKKLA+KMRQNRPIPHWIRMRTDNTI                         
Sbjct: 22  MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTI------------------------- 56

Query: 223 XXXXRYNAKRRHWRRTKLGF 282
               RYNAKRRHWRRTKLGF
Sbjct: 57  ----RYNAKRRHWRRTKLGF 72


>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
          Length = 70

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/80 (61%), Positives = 51/80 (63%)
 Frame = +1

Query: 43  MPSHKTFIIKKKLARKMRQNRPIPHWIRMRTDNTIRXXXXXXXXXXXXXXXXXXXXXXXX 222
           MPSHKTF+IKKKLA+KMRQNRPIPHWIRMRTDNTI                         
Sbjct: 20  MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTI------------------------- 54

Query: 223 XXXXRYNAKRRHWRRTKLGF 282
               RYNAKRRHWRRTKLGF
Sbjct: 55  ----RYNAKRRHWRRTKLGF 70


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