BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029592
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    65   4e-09

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/98 (34%), Positives = 60/98 (61%)
 Frame = +2

Query: 2   LLEGRLENVENLITERVDSAVERALTAAIAAMRVSLAEQIRESQVEISKKAGVELEAVAM 181
           LLE ++ N++N I  ++  +V  A+ AA    ++++A+QI +   E  KK+  +L+    
Sbjct: 12  LLEAQMANLQNSIAAQISDSVGLAMEAA----KITIADQISQRMEEAMKKSKEDLDVANF 67

Query: 182 RLEGRINHSRESQEGVIN*IKGEQAKFHSEIRSAITTL 295
           RLEGRI  +RE+ EG++   + +Q KF +E+ SA+  L
Sbjct: 68  RLEGRIERTRENLEGMLTVARADQNKFQTEVSSALAKL 105