BLASTX nr result

ID: Cnidium21_contig00029579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029579
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...   113   1e-22
emb|CBI23464.3| unnamed protein product [Vitis vinifera]              113   1e-22
emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]   110   6e-22
ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ri...   103   1e-19
ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|2...   101   4e-19

>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score =  113 bits (282), Expect = 1e-22
 Identities = 62/143 (43%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
 Frame = -2

Query: 1340 EFAAENYVMPTGPAFNPYWSGMQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQD 1161
            + AAENY+MP  P + PYW+GMQ                                  PQ 
Sbjct: 498  DLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMPFGGV--LPQG 555

Query: 1160 PYGPPVNMIPF-PPQRNFAGYGMGFNGRPPVMSKEEFEARKADLMRKRELERRGDSRDLP 984
            P+G P  M+P  PPQR+ A +GMG N  PPVMS+EEFEARKADL R+RE ERRG+S++ P
Sbjct: 556  PFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEARKADLRRRRESERRGESKEFP 615

Query: 983  KERE-SREVTSSSGVPSIKSQSK 918
            K+RE  RE +    V ++K + K
Sbjct: 616  KDREYGREGSMGGDVSTMKPKPK 638


>emb|CBI23464.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  113 bits (282), Expect = 1e-22
 Identities = 62/143 (43%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
 Frame = -2

Query: 1340 EFAAENYVMPTGPAFNPYWSGMQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQD 1161
            + AAENY+MP  P + PYW+GMQ                                  PQ 
Sbjct: 503  DLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMPFGGV--LPQG 560

Query: 1160 PYGPPVNMIPF-PPQRNFAGYGMGFNGRPPVMSKEEFEARKADLMRKRELERRGDSRDLP 984
            P+G P  M+P  PPQR+ A +GMG N  PPVMS+EEFEARKADL R+RE ERRG+S++ P
Sbjct: 561  PFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEARKADLRRRRESERRGESKEFP 620

Query: 983  KERE-SREVTSSSGVPSIKSQSK 918
            K+RE  RE +    V ++K + K
Sbjct: 621  KDREYGREGSMGGDVSTMKPKPK 643


>emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]
          Length = 828

 Score =  110 bits (276), Expect = 6e-22
 Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
 Frame = -2

Query: 1340 EFAAENYVMPTGPAFNPYWSGMQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQD 1161
            + AAENY+MP  P + PYW+GMQ                                  PQ 
Sbjct: 503  DLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMPFGGV--LPQG 560

Query: 1160 PYGPPVNMIPF-PPQRNFAGYGMGFNGRPPVMSKEEFEARKADLMRKRELERRGDSRDLP 984
            P+G P  M+P  PPQR+ A +GMG N  PP MS+EEFEARKADL R+RE ERRG+S++ P
Sbjct: 561  PFGAPGYMLPVVPPQRDLADFGMGLNAAPPXMSREEFEARKADLRRRRESERRGESKEFP 620

Query: 983  KERE-SREVTSSSGVPSIKSQSK 918
            K+RE  RE +    V ++K + K
Sbjct: 621  KDREYXREGSMGGDVSTMKPKPK 643


>ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ricinus communis]
            gi|223529796|gb|EEF31732.1| retinoblastoma-binding
            protein, putative [Ricinus communis]
          Length = 868

 Score =  103 bits (256), Expect = 1e-19
 Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
 Frame = -2

Query: 1340 EFAAENYVMPTGP-AFNPYWSGMQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH-FP 1167
            + A E+Y+MP GP A+NPYW+GMQ                               G   P
Sbjct: 496  DLATESYMMPLGPSAYNPYWNGMQPGMESYMNPMNPFAAPMPFMGYGMGPLDMPFGGVMP 555

Query: 1166 QDPYGPPVNMIPF-PPQRNFAGYGMGFNGRPPVMSKEEFEARKADLMRKRELERRGDSRD 990
             DP+     M+P  PPQR+ A +GMG N  PP MS+EEFEARKADL R+RE ERR + R+
Sbjct: 556  PDPFSAQGYMMPVVPPQRDLADFGMGMNAGPPAMSREEFEARKADLRRRRENERRAE-RE 614

Query: 989  LPKERE-SREVTSSSGVPSIKSQ-----SKANLPPPSHANQ 885
             P++RE  REV+S   + S+KS+     S++  P P H ++
Sbjct: 615  FPRDREFGREVSSGVDISSMKSKPIPQPSRSGDPHPHHRHR 655


>ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|222841718|gb|EEE79265.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  101 bits (252), Expect = 4e-19
 Identities = 65/159 (40%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
 Frame = -2

Query: 1340 EFAAENYVMPTGP-AFNPYWSGMQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQ 1164
            + AAE+++MP GP AFNPYWSGMQT                                 P 
Sbjct: 177  DLAAESFMMPMGPSAFNPYWSGMQTGMEGYMAPYPGPMPFMGYGLSPLDMPYGGV--MPP 234

Query: 1163 DPYGPPVNMIP-FPPQRNFAGYGMGFNGRPPVMSKEEFEARKADLMRKRELERRGDSRDL 987
            DP+G    M+P  PPQR+ A +GM  N RPP+MS+EEFEARKAD+ R+RE ERR +    
Sbjct: 235  DPFGAQSYMMPAVPPQRDLAEFGMNMNLRPPLMSREEFEARKADVRRRRENERRAEREFS 294

Query: 986  PKERESREVTSSSGVPSIKSQSKANLPPPSHANQLPDYN 870
                  REV+    V S+KS+S     P S A+  P +N
Sbjct: 295  RDWDPGREVSGGGDVSSMKSKS----IPQSSASGDPHHN 329


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