BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029557
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72742.1| RAD23 protein, isoform II [Daucus carota]             211   1e-52
ref|XP_002512770.1| uv excision repair protein rad23, putative [...   191   8e-47
ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23...   189   5e-46
emb|CBI25247.3| unnamed protein product [Vitis vinifera]              189   5e-46
ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|2...   188   9e-46

>emb|CAA72742.1| RAD23 protein, isoform II [Daucus carota]
          Length = 379

 Score =  211 bits (536), Expect = 1e-52
 Identities = 124/200 (62%), Positives = 130/200 (65%), Gaps = 15/200 (7%)
 Frame = -3

Query: 556 MKLTIKTLKGSHFEIRAQPNDTVMAIKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 377
           MKLT+KTLKGSHFEIRAQPNDTVMAIKK+IED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRAQPNDTVMAIKKNIEDLQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 376 ESKISEDGFLVVMLGKSKTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVISNPAPAV 197
           ESKISEDGFLVVMLGKSKTM                                   PAPAV
Sbjct: 61  ESKISEDGFLVVMLGKSKTMSSTGTPAAQSSSAP------------------APTPAPAV 102

Query: 196 ISNPAP-------------VPEG--SSVIAPSDTYGQAASNVVVGTNLEQTIQRIXXXXX 62
              PAP             VPE   S   APSDTYG+AASNVV G+NLEQTIQ I     
Sbjct: 103 APAPAPAAAPASAVIPNTTVPEAPLSPAFAPSDTYGEAASNVVAGSNLEQTIQHIMDMGG 162

Query: 61  XXXXXXMVTRALRAAYNNPE 2
                 MV+RALRAAYNNPE
Sbjct: 163 GMWDTNMVSRALRAAYNNPE 182


>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223547781|gb|EEF49273.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 359

 Score =  191 bits (486), Expect = 8e-47
 Identities = 107/192 (55%), Positives = 122/192 (63%), Gaps = 7/192 (3%)
 Frame = -3

Query: 556 MKLTIKTLKGSHFEIRAQPNDTVMAIKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 377
           MKLT+KTLKGSHFEIR QPNDTVMA+KK+IEDVQGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 376 ESKISEDGFLVVMLGKSKTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVISNPAPAV 197
           ++K++EDGFLVVML KSKT                                  S+  PA 
Sbjct: 61  DNKVTEDGFLVVMLSKSKTSGSSG----------------------------TSSTQPAA 92

Query: 196 ISNPAPVPEGSSVIA-------PSDTYGQAASNVVVGTNLEQTIQRIXXXXXXXXXXXMV 38
            + P   P  +S  A        +DTYG+AASN+V G NLEQTIQ+I            V
Sbjct: 93  ATPPTTAPSSNSTPAVEVQPPTQTDTYGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETV 152

Query: 37  TRALRAAYNNPE 2
           TRALRAAYNNPE
Sbjct: 153 TRALRAAYNNPE 164


>ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23-1-like [Vitis
           vinifera]
          Length = 400

 Score =  189 bits (479), Expect = 5e-46
 Identities = 110/208 (52%), Positives = 128/208 (61%), Gaps = 23/208 (11%)
 Frame = -3

Query: 556 MKLTIKTLKGSHFEIRAQPNDTVMAIKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 377
           MKLT+KTLKGSHFEIR QP+DTVMA+KK+IEDVQGKDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 376 ESKISEDGFLVVMLGKSKTM--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVISNPAP 203
           E+K++EDGFLVVML KSK++                                A I+ PAP
Sbjct: 61  ENKVTEDGFLVVMLSKSKSIGATGTSSAQSASTPAPAAIPTPAPAPIPTPAPAPIATPAP 120

Query: 202 AVISNPAPVPEGSSVI-AP--------------------SDTYGQAASNVVVGTNLEQTI 86
           A I+ PAP P  ++   AP                    +DTYGQAASN+V   +LEQTI
Sbjct: 121 APIATPAPAPNPTAAAEAPVNAQAPRSISTSEVATDSVLADTYGQAASNIVSANHLEQTI 180

Query: 85  QRIXXXXXXXXXXXMVTRALRAAYNNPE 2
           Q+I            VTRALRAAYNNPE
Sbjct: 181 QQIMDIGGGTWDKETVTRALRAAYNNPE 208


>emb|CBI25247.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  189 bits (479), Expect = 5e-46
 Identities = 110/208 (52%), Positives = 128/208 (61%), Gaps = 23/208 (11%)
 Frame = -3

Query: 556 MKLTIKTLKGSHFEIRAQPNDTVMAIKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 377
           MKLT+KTLKGSHFEIR QP+DTVMA+KK+IEDVQGKDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 376 ESKISEDGFLVVMLGKSKTM--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVISNPAP 203
           E+K++EDGFLVVML KSK++                                A I+ PAP
Sbjct: 61  ENKVTEDGFLVVMLSKSKSIGATGTSSAQSASTPAPAAIPTPAPAPIPTPAPAPIATPAP 120

Query: 202 AVISNPAPVPEGSSVI-AP--------------------SDTYGQAASNVVVGTNLEQTI 86
           A I+ PAP P  ++   AP                    +DTYGQAASN+V   +LEQTI
Sbjct: 121 APIATPAPAPNPTAAAEAPVNAQAPRSISTSEVATDSVLADTYGQAASNIVSANHLEQTI 180

Query: 85  QRIXXXXXXXXXXXMVTRALRAAYNNPE 2
           Q+I            VTRALRAAYNNPE
Sbjct: 181 QQIMDIGGGTWDKETVTRALRAAYNNPE 208


>ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|222841402|gb|EEE78949.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  188 bits (477), Expect = 9e-46
 Identities = 104/188 (55%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 MKLTIKTLKGSHFEIRAQPNDTVMAIKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 377
           MKLT+KTLKGSHFEI+  P DT+M +KK+IED QGKDNYPCGQQLLIHNGKVLKDE+TLA
Sbjct: 1   MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 376 ESKISEDGFLVVMLGKSKTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVISNP---A 206
           ++K++EDGFLVVML KSKT                                 +S P    
Sbjct: 61  DNKVTEDGFLVVMLSKSKT-----------------------GTAGTSSTQPVSTPPTTT 97

Query: 205 PAVISNPAPVPEGSSVIAPSDTYGQAASNVVVGTNLEQTIQRIXXXXXXXXXXXMVTRAL 26
           P  IS PAP    +   A SDTYGQAASN+V G+NLEQT+Q+I            VTRAL
Sbjct: 98  PTSISTPAP---DAQAFAQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRAL 154

Query: 25  RAAYNNPE 2
           RAAYNNPE
Sbjct: 155 RAAYNNPE 162