BLASTX nr result

ID: Cnidium21_contig00029550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029550
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36
emb|CBI36037.3| unnamed protein product [Vitis vinifera]              154   6e-36
emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]   154   6e-36
ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   153   1e-35
ref|XP_002327364.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   VEMACRLLDEMLAVGCCPNIVTYNILLDCLEKCGRTAEAVDLYARLKQQGLTPDSITYAV 182
           VEMACRL DEMLA GC PNIVTYNILLDCLE+ GRTAEAVDLYA+LKQQGLTPDSITYAV
Sbjct: 405 VEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 464

Query: 183 LERLQSASHRTVRIRRQNPVTGWIVS 260
           LERLQS SH+ VR+RR+NP+TGW+VS
Sbjct: 465 LERLQSGSHQKVRVRRKNPITGWVVS 490


>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   VEMACRLLDEMLAVGCCPNIVTYNILLDCLEKCGRTAEAVDLYARLKQQGLTPDSITYAV 182
           VEMACRL DEMLA GC PNIVTYNILLDCLE+ GRTAEAVDLYA+LKQQGLTPDSITYAV
Sbjct: 558 VEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 617

Query: 183 LERLQSASHRTVRIRRQNPVTGWIVS 260
           LERLQS SH+ VR+RR+NP+TGW+VS
Sbjct: 618 LERLQSGSHQKVRVRRKNPITGWVVS 643


>emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
          Length = 790

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   VEMACRLLDEMLAVGCCPNIVTYNILLDCLEKCGRTAEAVDLYARLKQQGLTPDSITYAV 182
           VEMACRL DEMLA GC PNIVTYNILLDCLE+ GRTAEAVDLYA+LKQQGLTPDSITYAV
Sbjct: 622 VEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 681

Query: 183 LERLQSASHRTVRIRRQNPVTGWIVS 260
           LERLQS SH+ VR+RR+NP+TGW+VS
Sbjct: 682 LERLQSGSHQKVRVRRKNPITGWVVS 707


>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  153 bits (387), Expect = 1e-35
 Identities = 72/86 (83%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   VEMACRLLDEMLAVGCCPNIVTYNILLDCLEKCGRTAEAVDLYARLKQQGLTPDSITYAV 182
           VEMACRL DEMLA GC PNIVTYNILLDCLE+ GRTAEAVDLYA+LKQQGLTPDSITY+V
Sbjct: 405 VEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSV 464

Query: 183 LERLQSASHRTVRIRRQNPVTGWIVS 260
           LERLQS SHR +R+RR+NP+TGW+VS
Sbjct: 465 LERLQSGSHRKLRVRRKNPITGWVVS 490


>ref|XP_002327364.1| predicted protein [Populus trichocarpa] gi|222835734|gb|EEE74169.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/86 (82%), Positives = 78/86 (90%)
 Frame = +3

Query: 3   VEMACRLLDEMLAVGCCPNIVTYNILLDCLEKCGRTAEAVDLYARLKQQGLTPDSITYAV 182
           VEMACRL DEMLA GC PNIVTYNILLDCLE+ GRTAEAVDLYA+LKQQGL PDSITY+V
Sbjct: 574 VEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSV 633

Query: 183 LERLQSASHRTVRIRRQNPVTGWIVS 260
           L RLQS SHR VR+R+QNP+TGW+VS
Sbjct: 634 LARLQSGSHRKVRVRKQNPITGWVVS 659


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