BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029543
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-...   439   e-121
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-...   437   e-120
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]        432   e-119
ref|XP_002333974.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118
ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118

>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
          Length = 1307

 Score =  439 bits (1128), Expect = e-121
 Identities = 220/305 (72%), Positives = 257/305 (84%), Gaps = 9/305 (2%)
 Frame = +2

Query: 2    GDENYDPKTLYLPSHFLNSLTGGQRQWWEFKSMNMDKVLFFKMGKFYELFEMDAHIGAKE 181
            GD +YDPKTL+LP +F+ +L+ GQRQWWEFKS +MDKVLFFKMGKFYELFEMDAHIGAKE
Sbjct: 325  GDPDYDPKTLHLPPYFVKNLSDGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKE 384

Query: 182  LDLQYMKGTQPHCGFPEKNFSMYIEKLAQKGYRVLVVEQTETPAQLDLRRKEQGSKDKVV 361
            LDLQYMKG QPHCGFPE+NFS+ +EKLA+KGYRVLV+EQTETP QL+ RRKE+GSKDKVV
Sbjct: 385  LDLQYMKGDQPHCGFPERNFSLNVEKLARKGYRVLVIEQTETPEQLERRRKEKGSKDKVV 444

Query: 362  KREICAVVTKGTLTEGELQSANPDASYIMAVAECCQSLSDQERRIFGVCVVDVATSKILL 541
            KREICAVVTKGTLTEGE+ S NPDASY+MAV E    L +Q+ RI GVCVVDVATS+++L
Sbjct: 445  KREICAVVTKGTLTEGEMLSLNPDASYLMAVTENFYGLENQQERILGVCVVDVATSRVIL 504

Query: 542  GQFEDGTECSVLSCLLTELRPVEIIKPAKLLSPETERVLQRHTRNPLVNELVPLTQFWDA 721
            GQF D +ECS L CLL+ELRPVEIIKPAKLLSPETERVL  HTRNPLVNELVPL +FWDA
Sbjct: 505  GQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHTRNPLVNELVPLLEFWDA 564

Query: 722  ERTSCEVKDIYK-----RINGSVSHAT---DPSGKERD-LNYLPEILSELVTAGDKGIHA 874
            E+T  EVK ++K      ++GS S A+   D + +E D L+Y+P++LSELVTA + G  A
Sbjct: 565  EKTVQEVKRLFKGIANRSVSGSSSEASLLNDNAARENDGLSYMPDVLSELVTADENGSWA 624

Query: 875  LSALG 889
            LSALG
Sbjct: 625  LSALG 629


>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
          Length = 1297

 Score =  437 bits (1125), Expect = e-120
 Identities = 220/304 (72%), Positives = 254/304 (83%), Gaps = 8/304 (2%)
 Frame = +2

Query: 2    GDENYDPKTLYLPSHFLNSLTGGQRQWWEFKSMNMDKVLFFKMGKFYELFEMDAHIGAKE 181
            GD NYDP+TLYLP +FL +LTGGQRQWWEFKS +MDKV+FFKMGKFYELFEMDAHIGAKE
Sbjct: 315  GDANYDPRTLYLPPNFLKNLTGGQRQWWEFKSRHMDKVIFFKMGKFYELFEMDAHIGAKE 374

Query: 182  LDLQYMKGTQPHCGFPEKNFSMYIEKLAQKGYRVLVVEQTETPAQLDLRRKEQGSKDKVV 361
            LDLQYMKG QPHCGFPEKNFS+ +EKLA+KGYRVLVVEQTETP QL+LRRKE+GSKDKVV
Sbjct: 375  LDLQYMKGGQPHCGFPEKNFSINVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVV 434

Query: 362  KREICAVVTKGTLTEGELQSANPDASYIMAVAECCQSLSDQERRIFGVCVVDVATSKILL 541
            KREICAVVTKGTLTEGE+ SANPDASY+MAV E CQ     E R FGVCVVDVATS+I+L
Sbjct: 435  KREICAVVTKGTLTEGEMLSANPDASYLMAVTESCQF----EERSFGVCVVDVATSRIIL 490

Query: 542  GQFEDGTECSVLSCLLTELRPVEIIKPAKLLSPETERVLQRHTRNPLVNELVPLTQFWDA 721
            GQF D +ECS L CLL+ELRPVEIIKPA LLSPETER L RHTR+PLVNELVP+++FWD+
Sbjct: 491  GQFRDDSECSTLCCLLSELRPVEIIKPANLLSPETERALMRHTRSPLVNELVPISEFWDS 550

Query: 722  ERTSCEVKDIYK-----RINGSVSHA---TDPSGKERDLNYLPEILSELVTAGDKGIHAL 877
            ++T  E++ +Y+      ++GS++ A      S  E D   LP+ILS+LV AG+ G  AL
Sbjct: 551  KKTVSEIRSVYRCFNDLSVSGSLNEANLSVKGSFVEEDPLGLPDILSKLVNAGESGSLAL 610

Query: 878  SALG 889
            SALG
Sbjct: 611  SALG 614


>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 1303

 Score =  432 bits (1110), Expect = e-119
 Identities = 211/305 (69%), Positives = 253/305 (82%), Gaps = 10/305 (3%)
 Frame = +2

Query: 5    DENYDPKTLYLPSHFLNSLTGGQRQWWEFKSMNMDKVLFFKMGKFYELFEMDAHIGAKEL 184
            D NYDP+TLYLP +FL  LTGGQRQWWEFKS +MDKVLFFKMGKFYEL+EMDAHIGA EL
Sbjct: 324  DANYDPRTLYLPPNFLKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELYEMDAHIGANEL 383

Query: 185  DLQYMKGTQPHCGFPEKNFSMYIEKLAQKGYRVLVVEQTETPAQLDLRRKEQGSKDKVVK 364
             LQYMKG QPHCGFPEKNFSM +EKLA+KGYRVLVVEQTETP QL++RR+E+GSKDKVV+
Sbjct: 384  HLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLEIRRREKGSKDKVVR 443

Query: 365  REICAVVTKGTLTEGELQSANPDASYIMAVAECCQSLSDQE-RRIFGVCVVDVATSKILL 541
            RE+CAVVTKGTLTEGE+ +ANPDASY+MAV E  Q+ + Q+ +  +GVC+VD+ TSKI+L
Sbjct: 444  REVCAVVTKGTLTEGEMLAANPDASYLMAVTESFQTAAYQQGKHTYGVCMVDITTSKIIL 503

Query: 542  GQFEDGTECSVLSCLLTELRPVEIIKPAKLLSPETERVLQRHTRNPLVNELVPLTQFWDA 721
            GQFED ++CS L CLL+ELRPVE+IKPAKLLS ETERV+ RHTRNPLVNELVPL++FWDA
Sbjct: 504  GQFEDDSDCSALCCLLSELRPVEVIKPAKLLSLETERVMLRHTRNPLVNELVPLSEFWDA 563

Query: 722  ERTSCEVKDIYKRI---------NGSVSHATDPSGKERDLNYLPEILSELVTAGDKGIHA 874
            ERT  EVK IY+ +         NG  +H  + S ++   ++LP++L ELV  G+ G +A
Sbjct: 564  ERTISEVKRIYRNMSSSPLSSSPNGMGAHENNTSEEDGQRDFLPDVLYELVNLGENGSYA 623

Query: 875  LSALG 889
            LSALG
Sbjct: 624  LSALG 628


>ref|XP_002333974.1| predicted protein [Populus trichocarpa] gi|222839403|gb|EEE77740.1|
            predicted protein [Populus trichocarpa]
          Length = 805

 Score =  431 bits (1108), Expect = e-118
 Identities = 223/308 (72%), Positives = 250/308 (81%), Gaps = 12/308 (3%)
 Frame = +2

Query: 2    GDENYDPKTLYLPSHFLNSLTGGQRQWWEFKSMNMDKVLFFKMGKFYELFEMDAHIGAKE 181
            GD +YDP+TLYLP+ F  SLTGGQRQWWEFKS +MDKVLFFKMGKFYELFEMDAH+GAKE
Sbjct: 344  GDVDYDPRTLYLPAEFAKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKE 403

Query: 182  LDLQYMKGTQPHCGFPEKNFSMYIEKLAQKGYRVLVVEQTETPAQLDLRRKEQGSKDKVV 361
            LDLQYMKG QPHCGFPEKNFS+ +EKLA+KGYRVLVVEQTETP QL+LR KE+GSKDKVV
Sbjct: 404  LDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRVLVVEQTETPEQLELRHKEKGSKDKVV 463

Query: 362  KREICAVVTKGTLTEGELQSANPDASYIMAVAECCQSLSDQE-RRIFGVCVVDVATSKIL 538
            KREICAV+TKGTLTEGE  SANPDASY+MA+ E  QSL++Q   RIFGVCVVDV TS+I+
Sbjct: 464  KREICAVITKGTLTEGEFLSANPDASYLMALTESSQSLANQGLERIFGVCVVDVTTSRII 523

Query: 539  LGQFEDGTECSVLSCLLTELRPVEIIKPAKLLSPETERVLQRHTRNPLVNELVPLTQFWD 718
            LGQF D  ECS L CLL+ELRPVEI+KPAK+LS ETERV+ RHTRNPLVNEL PL++FWD
Sbjct: 524  LGQFGDDAECSSLCCLLSELRPVEIVKPAKMLSSETERVMVRHTRNPLVNELAPLSEFWD 583

Query: 719  AERTSCEVKDIYKRINGSVSHATDPSGK-----------ERDLNYLPEILSELVTAGDKG 865
            AERT  EVK IYK I G +S A+ P  K           E   + LP ILSE V  G+ G
Sbjct: 584  AERTVQEVKTIYKHI-GDLS-ASGPLNKTDLDTTNLNVGEYRPSCLPSILSEFVNKGENG 641

Query: 866  IHALSALG 889
              ALSALG
Sbjct: 642  SLALSALG 649


>ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|222861080|gb|EEE98622.1|
            predicted protein [Populus trichocarpa]
          Length = 1288

 Score =  430 bits (1105), Expect = e-118
 Identities = 223/308 (72%), Positives = 250/308 (81%), Gaps = 12/308 (3%)
 Frame = +2

Query: 2    GDENYDPKTLYLPSHFLNSLTGGQRQWWEFKSMNMDKVLFFKMGKFYELFEMDAHIGAKE 181
            GD +YDP+TLYLP+ F  SLTGGQRQWWEFKS +MDKVLFFKMGKFYELFEMDAH+GAKE
Sbjct: 293  GDVDYDPRTLYLPAEFAKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKE 352

Query: 182  LDLQYMKGTQPHCGFPEKNFSMYIEKLAQKGYRVLVVEQTETPAQLDLRRKEQGSKDKVV 361
            LDLQYMKG QPHCGFPEKNFS+ +EKLA+KGYRVLVVEQTETP QL+LRRKE+GSKDKVV
Sbjct: 353  LDLQYMKGEQPHCGFPEKNFSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVV 412

Query: 362  KREICAVVTKGTLTEGELQSANPDASYIMAVAECCQSLSDQE-RRIFGVCVVDVATSKIL 538
            KREICAV+TKGTLTEGE  SANPDASY+MA+ E  QSL++Q   RIFGVCVVDV TS+I+
Sbjct: 413  KREICAVITKGTLTEGEFLSANPDASYLMALTESRQSLANQGLERIFGVCVVDVTTSRII 472

Query: 539  LGQFEDGTECSVLSCLLTELRPVEIIKPAKLLSPETERVLQRHTRNPLVNELVPLTQFWD 718
            LGQF D  ECS L CLL+ELRPVEI+KPAK+LS ETERV+ RHTRNPLVNEL PL++FWD
Sbjct: 473  LGQFGDDAECSSLCCLLSELRPVEIVKPAKMLSSETERVMVRHTRNPLVNELAPLSEFWD 532

Query: 719  AERTSCEVKDIYKRINGSVSHATDPSGK-----------ERDLNYLPEILSELVTAGDKG 865
            AERT  EVK IYK I G +S A+ P  K           E   + LP IL E V  G+ G
Sbjct: 533  AERTVQEVKTIYKHI-GDLS-ASGPLNKTDLDTTNLNVGEYRPSCLPSILLEFVNKGENG 590

Query: 866  IHALSALG 889
              ALSALG
Sbjct: 591  SLALSALG 598