BLASTX nr result

ID: Cnidium21_contig00029439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029439
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti...   199   2e-49
emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera]   199   2e-49
ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49

>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
           predicted protein [Populus trichocarpa]
           gi|222833766|gb|EEE72243.1| predicted protein [Populus
           trichocarpa]
          Length = 496

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/121 (80%), Positives = 110/121 (90%)
 Frame = -2

Query: 363 FTGTAIILGGNDNAVTDTVIFSAAIGIVIEGQANTLSGVHCYNKATPLGGVGVYLKVPGL 184
           F+GTAI L GNDNAVTD VIFSAAIG+++ GQANTLSGVHCYNKAT  GG G+YLK+P L
Sbjct: 266 FSGTAINLMGNDNAVTDVVIFSAAIGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSL 325

Query: 183 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAFVLLRSINGVANGVNIVDNMFSGSDQ 4
           TQTRIVNCYLDYTGIVAEDPVQL ISS FFLGDA++LL+SING+A G+NIVDNMF+GSD+
Sbjct: 326 TQTRIVNCYLDYTGIVAEDPVQLTISSCFFLGDAYILLKSINGLAKGINIVDNMFAGSDK 385

Query: 3   G 1
           G
Sbjct: 386 G 386


>ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/121 (79%), Positives = 109/121 (90%)
 Frame = -2

Query: 363 FTGTAIILGGNDNAVTDTVIFSAAIGIVIEGQANTLSGVHCYNKATPLGGVGVYLKVPGL 184
           F+GTAI L GNDNAVTD VIFSAAIG+++ GQANTLSGVHCYN AT  GG G+YLK+P L
Sbjct: 106 FSGTAINLMGNDNAVTDVVIFSAAIGVMVSGQANTLSGVHCYNLATGFGGTGIYLKLPSL 165

Query: 183 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAFVLLRSINGVANGVNIVDNMFSGSDQ 4
           TQTRIVNCYLDYTGIVAEDPVQL ISS FFLGDA++LL+SING+A G+NIVDNMF+GSD+
Sbjct: 166 TQTRIVNCYLDYTGIVAEDPVQLTISSCFFLGDAYILLKSINGLAKGINIVDNMFAGSDK 225

Query: 3   G 1
           G
Sbjct: 226 G 226


>ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera]
          Length = 505

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/121 (76%), Positives = 109/121 (90%)
 Frame = -2

Query: 363 FTGTAIILGGNDNAVTDTVIFSAAIGIVIEGQANTLSGVHCYNKATPLGGVGVYLKVPGL 184
           F+GTAI + GNDNA+TD VI+SAA+G+++ GQANTLSGVHCYNKAT  GG G+YLK+P L
Sbjct: 278 FSGTAINIVGNDNAITDVVIYSAAVGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSL 337

Query: 183 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAFVLLRSINGVANGVNIVDNMFSGSDQ 4
           TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDA+++ +SINGVA GV++V NMFSGS +
Sbjct: 338 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAYIVFKSINGVARGVSVVGNMFSGSGK 397

Query: 3   G 1
           G
Sbjct: 398 G 398


>emb|CAN67113.1| hypothetical protein VITISV_025312 [Vitis vinifera]
          Length = 448

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/121 (76%), Positives = 109/121 (90%)
 Frame = -2

Query: 363 FTGTAIILGGNDNAVTDTVIFSAAIGIVIEGQANTLSGVHCYNKATPLGGVGVYLKVPGL 184
           F+GTAI + GNDNA+TD VI+SAA+G+++ GQANTLSGVHCYNKAT  GG G+YLK+P L
Sbjct: 221 FSGTAINIVGNDNAITDVVIYSAAVGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSL 280

Query: 183 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAFVLLRSINGVANGVNIVDNMFSGSDQ 4
           TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDA+++ +SINGVA GV++V NMFSGS +
Sbjct: 281 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAYIVFKSINGVARGVSVVGNMFSGSGK 340

Query: 3   G 1
           G
Sbjct: 341 G 341


>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/121 (77%), Positives = 109/121 (90%)
 Frame = -2

Query: 363 FTGTAIILGGNDNAVTDTVIFSAAIGIVIEGQANTLSGVHCYNKATPLGGVGVYLKVPGL 184
           F+GTAI L GNDNAVTD VIFSAAIG++I GQANTLSGVHCYNKAT  GG G+YLK+P L
Sbjct: 259 FSGTAINLMGNDNAVTDVVIFSAAIGVMISGQANTLSGVHCYNKATGFGGTGIYLKLPSL 318

Query: 183 TQTRIVNCYLDYTGIVAEDPVQLHISSSFFLGDAFVLLRSINGVANGVNIVDNMFSGSDQ 4
           TQTRI+NCYLDY+GIVAEDPVQL ISSSFFLGDA++L +S+ G+A G+NIVDNMFSGS++
Sbjct: 319 TQTRILNCYLDYSGIVAEDPVQLTISSSFFLGDAYILFKSVKGLAKGINIVDNMFSGSNK 378

Query: 3   G 1
           G
Sbjct: 379 G 379


Top