BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029411
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527601.1| pentatricopeptide repeat-containing protein,...   440   e-121
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              436   e-120
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...   436   e-120
ref|XP_002316903.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-111

>ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533018|gb|EEF34782.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score =  440 bits (1132), Expect = e-121
 Identities = 221/375 (58%), Positives = 281/375 (74%), Gaps = 2/375 (0%)
 Frame = +2

Query: 17   SNGLLQRITNFQNPQVSIVPVLDQWIKEGNKIKPPDLQRLIRTLRSRKRYSQALQLSEWG 196
            SN L  RI+    P +S+VPVLD W++EG KI+  +LQ++IR LR  +RY+QALQ+SEW 
Sbjct: 34   SNTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWM 93

Query: 197  STNNFCRDSSGNHAVQLDLIGAVRGLDAAESYFSNLTDTDKDERTYGALLSRYTREGLVD 376
            +       S  +HAVQLDLIG VRGL++AESYF NL + D++++TYGALL+ Y REGLVD
Sbjct: 94   NGKGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVD 153

Query: 377  KSLSLMQTMKEIGFASRPLAYNNLMYLYSNTDQPEKILDVLSEMKKSGIPPDNSSYRICI 556
            KSL  MQ MKE+GFAS PL YN+LM LY+ T Q EK+ DVLSEMK++GI PD  SYRIC+
Sbjct: 154  KSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICM 213

Query: 557  NSCGERSDFINMEKLLEDMESQPHITMDWTTYSTAVSHYIKGNQKEKALVVLRKLE-KIN 733
            +SC  RSD   +E++LE+ME+Q HI++DW TYST  S Y+K + KEKAL+ L+K E K+N
Sbjct: 214  SSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVKASLKEKALIYLKKCEQKVN 273

Query: 734  KEANGYSHLISHYAKLGNKDEVMRLWGIQKLR-KKQDNTDYIMMLGTLVTLGELQESEKV 910
            ++A GY+HLIS  A LG KDEVMRLWG+ K + KKQ N DYI MLG LV L EL+E++K+
Sbjct: 274  RDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKL 333

Query: 911  LKEWESLCHTFDFRVPNALYMGLCSKGLTEKAETMLRHMIDTGKTPIPNSWVIISCGYVE 1090
            L+EWES C  +DFRVPN L +G C +GL EKAE ML+ ++   K P PNSW II+ GYV 
Sbjct: 334  LQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNSWAIIAAGYVN 393

Query: 1091 MENMEKASKCMKEAL 1135
             +NMEKA  CMKEAL
Sbjct: 394  KQNMEKAFNCMKEAL 408


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  436 bits (1121), Expect = e-120
 Identities = 219/373 (58%), Positives = 282/373 (75%), Gaps = 2/373 (0%)
 Frame = +2

Query: 26   LLQRITNFQNPQVSIVPVLDQWIKEGNKIKPPDLQRLIRTLRSRKRYSQALQLSEWGSTN 205
            L  RI+    P +S+VPVLDQW++EG K++  +L R+IR LRSRKRY+QAL++SEW S+ 
Sbjct: 39   LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98

Query: 206  NFCRDSSGNHAVQLDLIGAVRGLDAAESYFSNLTDTDKDERTYGALLSRYTREGLVDKSL 385
              C  S    AVQLDLIG VRGL++AE+YF+N++  +K ++ YGALL+ Y RE ++DKSL
Sbjct: 99   ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158

Query: 386  SLMQTMKEIGFASRPLAYNNLMYLYSNTDQPEKILDVLSEMKKSGIPPDNSSYRICINSC 565
            S +Q MKE+GFAS PL YN LM LY NTDQ EKI DVLSEM+++GI PDN SYR+CINS 
Sbjct: 159  SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218

Query: 566  GERSDFINMEKLLEDMESQPHITMDWTTYSTAVSHYIKGNQKEKALVVLRKLE-KINKEA 742
            G RSD  +MEK+LE+MES+ HI +DW TYS   + YIK    EKAL  L+K E K++K+ 
Sbjct: 219  GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKDP 278

Query: 743  NGYSHLISHYAKLGNKDEVMRLWGIQK-LRKKQDNTDYIMMLGTLVTLGELQESEKVLKE 919
             GY+HLIS YA LG+K E+MRLW  +K   KK  N DYI MLG+LV LGEL+++E +LKE
Sbjct: 279  LGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKE 338

Query: 920  WESLCHTFDFRVPNALYMGLCSKGLTEKAETMLRHMIDTGKTPIPNSWVIISCGYVEMEN 1099
            WES  + +DFRVPN L +G C KGL EKAE+MLR +++ GKTP PNSW I++ GY+E +N
Sbjct: 339  WESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQN 398

Query: 1100 MEKASKCMKEALA 1138
            MEKA +CMKEA+A
Sbjct: 399  MEKAFECMKEAIA 411


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial [Vitis vinifera]
          Length = 504

 Score =  436 bits (1121), Expect = e-120
 Identities = 219/373 (58%), Positives = 282/373 (75%), Gaps = 2/373 (0%)
 Frame = +2

Query: 26   LLQRITNFQNPQVSIVPVLDQWIKEGNKIKPPDLQRLIRTLRSRKRYSQALQLSEWGSTN 205
            L  RI+    P +S+VPVLDQW++EG K++  +L R+IR LRSRKRY+QAL++SEW S+ 
Sbjct: 39   LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98

Query: 206  NFCRDSSGNHAVQLDLIGAVRGLDAAESYFSNLTDTDKDERTYGALLSRYTREGLVDKSL 385
              C  S    AVQLDLIG VRGL++AE+YF+N++  +K ++ YGALL+ Y RE ++DKSL
Sbjct: 99   ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158

Query: 386  SLMQTMKEIGFASRPLAYNNLMYLYSNTDQPEKILDVLSEMKKSGIPPDNSSYRICINSC 565
            S +Q MKE+GFAS PL YN LM LY NTDQ EKI DVLSEM+++GI PDN SYR+CINS 
Sbjct: 159  SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218

Query: 566  GERSDFINMEKLLEDMESQPHITMDWTTYSTAVSHYIKGNQKEKALVVLRKLE-KINKEA 742
            G RSD  +MEK+LE+MES+ HI +DW TYS   + YIK    EKAL  L+K E K++K+ 
Sbjct: 219  GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKDP 278

Query: 743  NGYSHLISHYAKLGNKDEVMRLWGIQK-LRKKQDNTDYIMMLGTLVTLGELQESEKVLKE 919
             GY+HLIS YA LG+K E+MRLW  +K   KK  N DYI MLG+LV LGEL+++E +LKE
Sbjct: 279  LGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKE 338

Query: 920  WESLCHTFDFRVPNALYMGLCSKGLTEKAETMLRHMIDTGKTPIPNSWVIISCGYVEMEN 1099
            WES  + +DFRVPN L +G C KGL EKAE+MLR +++ GKTP PNSW I++ GY+E +N
Sbjct: 339  WESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQN 398

Query: 1100 MEKASKCMKEALA 1138
            MEKA +CMKEA+A
Sbjct: 399  MEKAFECMKEAIA 411


>ref|XP_002316903.1| predicted protein [Populus trichocarpa] gi|222859968|gb|EEE97515.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  421 bits (1081), Expect = e-115
 Identities = 212/373 (56%), Positives = 278/373 (74%), Gaps = 2/373 (0%)
 Frame = +2

Query: 26   LLQRITNFQNPQVSIVPVLDQWIKEGNKIKPPDLQRLIRTLRSRKRYSQALQLSEWGSTN 205
            L  RI+   +P++S+ PVLDQW++EG K+K  +L+ +++ LR RKR+ QAL++S+W S+N
Sbjct: 2    LYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSN 61

Query: 206  NFCRDSSGNHAVQLDLIGAVRGLDAAESYFSNLTDTDKDERTYGALLSRYTREGLVDKSL 385
              C  S  + AV+LDLIG V GL++AESYF NL + DK  +TYGALL+ Y R GLV+KSL
Sbjct: 62   RLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSL 121

Query: 386  SLMQTMKEIGFASRPLAYNNLMYLYSNTDQPEKILDVLSEMKKSGIPPDNSSYRICINSC 565
            S +Q MKE+GF S  L YN+LM LY NT   EK+ DVLS+MK++GI PD  SYRIC+ S 
Sbjct: 122  SHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSY 181

Query: 566  GERSDFINMEKLLEDMESQPHITMDWTTYSTAVSHYIKGNQKEKALVVLRKL-EKINKEA 742
            GERSDF N+EK+L +MESQ HI+MDW T++T  + Y++   KEKALV L+K  EK+NK A
Sbjct: 182  GERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKVNKNA 241

Query: 743  NGYSHLISHYAKLGNKDEVMRLWGIQKLR-KKQDNTDYIMMLGTLVTLGELQESEKVLKE 919
             GY+HLIS YA LGNKDE+MRLW + K   KKQ N DYI +LG+LV LG L+E+EK+L++
Sbjct: 242  LGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLLQD 301

Query: 920  WESLCHTFDFRVPNALYMGLCSKGLTEKAETMLRHMIDTGKTPIPNSWVIISCGYVEMEN 1099
            WES C  +DFRVPN + +G   KGL EKAE ML+ +I+  K   P+SW IIS GY++ +N
Sbjct: 302  WESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMDKQN 361

Query: 1100 MEKASKCMKEALA 1138
            MEKA +CMKEALA
Sbjct: 362  MEKAFECMKEALA 374


>ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Cucumis sativus]
            gi|449478158|ref|XP_004155237.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Cucumis sativus]
          Length = 492

 Score =  405 bits (1042), Expect = e-111
 Identities = 202/372 (54%), Positives = 274/372 (73%), Gaps = 1/372 (0%)
 Frame = +2

Query: 26   LLQRITNFQNPQVSIVPVLDQWIKEGNKIKPPDLQRLIRTLRSRKRYSQALQLSEWGSTN 205
            L  RI+   +P+ ++VPVL+QWI+EG  IK  +L+R++R LR+ +RY QAL++SEW  + 
Sbjct: 48   LYARISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSK 107

Query: 206  NFCRDSSGNHAVQLDLIGAVRGLDAAESYFSNLTDTDKDERTYGALLSRYTREGLVDKSL 385
                 ++ + A+QLDLIG VRGLD+AE YF ++++  +  + YGALL+ Y REGL+DKSL
Sbjct: 108  GLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSL 167

Query: 386  SLMQTMKEIGFASRPLAYNNLMYLYSNTDQPEKILDVLSEMKKSGIPPDNSSYRICINSC 565
            + MQ MKE+G AS PL YN++M LY NT Q +K+ +VLSEMK++G+ PDN SYRICI+S 
Sbjct: 168  AHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSY 227

Query: 566  GERSDFINMEKLLEDMESQPHITMDWTTYSTAVSHYIKGNQKEKALVVLRKLE-KINKEA 742
            G RSD I+ME +L++ME Q HI+MDWTTYS     +IK    +KA+  LRK E K++++A
Sbjct: 228  GARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDEDA 287

Query: 743  NGYSHLISHYAKLGNKDEVMRLWGIQKLRKKQDNTDYIMMLGTLVTLGELQESEKVLKEW 922
             G++HLISHY  LG+K+EVMRLW + K  KKQ N DYI MLG+LV L  L+E+E ++ EW
Sbjct: 288  LGFNHLISHYTNLGHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENLVMEW 347

Query: 923  ESLCHTFDFRVPNALYMGLCSKGLTEKAETMLRHMIDTGKTPIPNSWVIISCGYVEMENM 1102
            ES C  +DFRVPN + +G   KGL EKAE MLR++I  G  P PNSW II+ GY+E +N+
Sbjct: 348  ESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNL 407

Query: 1103 EKASKCMKEALA 1138
            EKA +CMKEALA
Sbjct: 408  EKAFECMKEALA 419