BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029406
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    81   8e-14
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    78   8e-13
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...    77   2e-12
gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]    76   3e-12
gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]    74   9e-12

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
 Frame = +3

Query: 12  RCVSKGWCSLIDSNAFAKKQLKTTLDCNAGAGLMIMKLGGYNKFYXXXXXXXXXXXXXVV 191
           R VSK WC+LID   F K  LK ++D ++    +I++   +  +              + 
Sbjct: 25  RSVSKPWCALIDGPNFVKLHLKHSMDTSSNL-YIILRTTSHVHYMDFEQNLVLNDCVTLK 83

Query: 192 EIDDPLKTFLCGAQFVGASNGLVCVMKNKGNDVFLLNPTIRKYKKIAPVPAEFPSSF--R 365
           E++ PL  +  G + +G+ NGL+C+  N  +D+ + NP+ RK++ +  +P E    F  +
Sbjct: 84  ELNHPLMCYNHGIKVLGSVNGLLCI-SNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTK 142

Query: 366 MIESYLCGFGYDEVNDDYKVVLIAE 440
               Y+ GFGYD V DDYK+V IA+
Sbjct: 143 SCSVYVFGFGYDSVRDDYKLVRIAQ 167


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 6   RFRCVSKGWCSLIDSNAFAKKQLKTTLDCNAGAGLMIMKLGGYNKFYXXXXXXXXXXXXX 185
           +F CVSK W  LI S AF KK +K T +        ++     N F              
Sbjct: 30  KFMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYHRLIFRNTNNDFKFCPLPPLFTNQQL 89

Query: 186 VVEI---DDPLKTFLCGAQFVGASNGLVCVMKNKGNDVFLLNPTIRKYKKIAPVPAEFPS 356
           + EI   D P++        VG+ NGL+CV   +  + ++ NP I K K++    +   S
Sbjct: 90  IEEILHIDSPIERTTLSTHIVGSVNGLICVAHVRQREAYIWNPAITKSKELPKSTSNLCS 149

Query: 357 SFRMIESYLCGFGYDEVNDDYKVVLI 434
                +   CGFGYDE  DDYKVV I
Sbjct: 150 -----DGIKCGFGYDESRDDYKVVFI 170


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
 Frame = +3

Query: 6   RFRCVSKGWCSLIDSNAFAKKQLKTTLDCNAGAGLMIMK--LGGYNKFYXXXXXXXXXXX 179
           RFRC+SK +C+LID+  F K  L T++       L++++    G  +FY           
Sbjct: 23  RFRCISKSYCTLIDNPDFIKAHLDTSIQTKPRKKLILLRHQSNGVAEFYAADHNGGLIDP 82

Query: 180 XXVVEIDDPLKTFLCGAQFVGASNGLVCVMKNKGNDVFLLNPTIRKYKKIAPVPAEFPSS 359
              +++  P+K+   G + VG+ N LV +M+N  + + L NP   +Y KI P P    ++
Sbjct: 83  ---IKLKSPIKSKSNGTRIVGSCNSLVLLMQNT-DKLLLWNPFTTQY-KILPEPQREKAT 137

Query: 360 F--RMIESYLCGFGYDEVNDDYKVVLIAEC 443
           F  + ++  + G GYD  +DDYKVV I +C
Sbjct: 138 FTSQYLQYDVFGLGYDAASDDYKVVRIQKC 167


>gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 327

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 6   RFRCVSKGWCSLIDSNAFAKKQLKTTLDCNAGAGLMIMKLGGYNKFYXXXXXXXXXXXXX 185
           +F CVSK W  LI S AF K  +K T D        ++     + F              
Sbjct: 31  KFMCVSKSWLQLISSPAFVKNHIKLTADDKGYIYHRLIFRNTNDDFKFCPLPPLFTQQQL 90

Query: 186 VVE---IDDPLKTFLCGAQFVGASNGLVCVMKNKGNDVFLLNPTIRKYKKIAPVPAEFPS 356
           + E   ID P++        VG+ NGL+C    +  + ++ NPTI K K++    +   S
Sbjct: 91  IKELYHIDSPIERTTLSTHIVGSVNGLICAAHVRQREAYIWNPTITKSKELPKSRSNLCS 150

Query: 357 SFRMIESYLCGFGYDEVNDDYKVVLI 434
                +   CGFGYDE  DDYKVV I
Sbjct: 151 -----DGIKCGFGYDESRDDYKVVFI 171


>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 6   RFRCVSKGWCSLIDSNAFAKKQLKTTLDCNA--GAGLMIMKLGGYNKF-YXXXXXXXXXX 176
           +F CVSK W  LI S  F K  +K T D        L+   + G  KF            
Sbjct: 31  KFMCVSKSWLQLISSPTFVKNHIKLTADDKGYIHHRLIFRNIDGNFKFCSLPPLFTKQQH 90

Query: 177 XXXVVEIDDPLKTFLCGAQFVGASNGLVCVMKNKGNDVFLLNPTIRKYKKIAPVPAEFPS 356
              +  ID P++        VG+ NGL+CV+  +  + ++ NPTI K K++    +   S
Sbjct: 91  TEELFHIDSPIERSTLSTHIVGSVNGLICVVHGQ-KEAYIWNPTITKSKELPKFTSNMCS 149

Query: 357 SFRMIESYLCGFGYDEVNDDYKVVLI 434
           S     S   GFGYDE  DDYKVV I
Sbjct: 150 S-----SIKYGFGYDESRDDYKVVFI 170