BLASTX nr result
ID: Cnidium21_contig00029402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00029402
(296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22530.3| unnamed protein product [Vitis vinifera] 165 3e-39
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 164 9e-39
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi... 164 9e-39
emb|CBI41122.3| unnamed protein product [Vitis vinifera] 164 9e-39
emb|CBI23560.3| unnamed protein product [Vitis vinifera] 164 9e-39
>emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 165 bits (418), Expect = 3e-39
Identities = 78/98 (79%), Positives = 86/98 (87%)
Frame = -3
Query: 294 KGEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFA 115
KGEQIH RLLK G++SNQ ICNALISMYS+CGNI AAFQVFN+MEDRN+ISWTS+ITGFA
Sbjct: 225 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 284
Query: 114 KHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
KHG A RA EMF QML G KPN++TYVAVLSACSH G
Sbjct: 285 KHGFATRALEMFHQMLETGTKPNEITYVAVLSACSHVG 322
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 164 bits (414), Expect = 9e-39
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = -3
Query: 294 KGEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFA 115
KGEQIH RLLK G++SNQ ICNALISMYS+CGNI AAFQVFN+MEDRN+ISWTS+ITGFA
Sbjct: 455 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 514
Query: 114 KHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
KHG A RA EMF +ML G KPN++TYVAVLSACSH G
Sbjct: 515 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 552
Score = 76.6 bits (187), Expect = 2e-12
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDM-EDRNIISWTSIITGFA 115
G+ +H +L++SG E + ++ N LIS+YSKCG+ A +F M R+++SW+++++ FA
Sbjct: 45 GKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 104
Query: 114 KHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHA 4
+ + +A F ML G PN+ + AV+ ACS+A
Sbjct: 105 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNA 141
Score = 72.0 bits (175), Expect = 5e-11
Identities = 39/99 (39%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = -3
Query: 291 GEQIHARLLKSGF-ESNQLICNALISMYSK-CGNIVAAFQVFNDMEDRNIISWTSIITGF 118
GE I+ ++K+G+ E++ + LI M+ K G++ +A++VF+ M +RN+++WT +IT F
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206
Query: 117 AKHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
A+ G A+ A ++F M L+G P+ TY +VLSAC+ G
Sbjct: 207 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Score = 69.3 bits (168), Expect = 3e-10
Identities = 32/99 (32%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKC---GNIVAAFQVFNDMEDRNIISWTSIITG 121
G+Q+H+R+++ G + + +L+ MY+KC G++ + +VF M + N++SWT+IIT
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 309
Query: 120 FAKHGLAQR-AQEMFTQMLLAGVKPNDVTYVAVLSACSH 7
+ + G + A E+F +M+ ++PN ++ +VL AC +
Sbjct: 310 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/97 (28%), Positives = 60/97 (61%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFAK 112
GEQ+++ +K G S + N+LISMY++ G + A + F+ + ++N++S+ +I+ G+AK
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 111 HGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
+ ++ A +F ++ G+ + T+ ++LS + G
Sbjct: 415 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 451
>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 164 bits (414), Expect = 9e-39
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = -3
Query: 294 KGEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFA 115
KGEQIH RLLK G++SNQ ICNALISMYS+CGNI AAFQVFN+MEDRN+ISWTS+ITGFA
Sbjct: 275 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 334
Query: 114 KHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
KHG A RA EMF +ML G KPN++TYVAVLSACSH G
Sbjct: 335 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 372
Score = 70.9 bits (172), Expect = 1e-10
Identities = 33/99 (33%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKC---GNIVAAFQVFNDMEDRNIISWTSIITG 121
G+Q+H+R+++ G + + +L+ MY+KC G++ + +VF M + N++SWT+IIT
Sbjct: 70 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 129
Query: 120 FAKHGLAQR-AQEMFTQMLLAGVKPNDVTYVAVLSACSH 7
+A+ G + A E+F +M+ ++PN ++ +VL AC +
Sbjct: 130 YAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 168
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = -3
Query: 186 AFQVFNDMEDRNIISWTSIITGFAKHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSH 7
A++VF+ M +RN+++WT +IT FA+ G A+ A ++F M L+G P+ TY +VLSAC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 6 AG 1
G
Sbjct: 64 LG 65
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/97 (28%), Positives = 60/97 (61%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFAK 112
GEQ+++ +K G S + N+LISMY++ G + A + F+ + ++N++S+ +I+ G+AK
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234
Query: 111 HGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
+ ++ A +F ++ G+ + T+ ++LS + G
Sbjct: 235 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 164 bits (414), Expect = 9e-39
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = -3
Query: 294 KGEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFA 115
KGEQIH RLLK G++SNQ ICNALISMYS+CGNI AAFQVFN+MEDRN+ISWTS+ITGFA
Sbjct: 280 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 339
Query: 114 KHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
KHG A RA EMF +ML G KPN++TYVAVLSACSH G
Sbjct: 340 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 377
Score = 70.9 bits (172), Expect = 1e-10
Identities = 33/99 (33%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKC---GNIVAAFQVFNDMEDRNIISWTSIITG 121
G+Q+H+R+++ G + + +L+ MY+KC G++ + +VF M + N++SWT+IIT
Sbjct: 75 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 134
Query: 120 FAKHGLAQR-AQEMFTQMLLAGVKPNDVTYVAVLSACSH 7
+A+ G + A E+F +M+ ++PN ++ +VL AC +
Sbjct: 135 YAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 173
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = -3
Query: 186 AFQVFNDMEDRNIISWTSIITGFAKHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSH 7
A++VF+ M +RN+++WT +IT FA+ G A+ A ++F M L+G P+ TY +VLSAC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 6 AG 1
G
Sbjct: 69 LG 70
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/97 (28%), Positives = 60/97 (61%)
Frame = -3
Query: 291 GEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFAK 112
GEQ+++ +K G S + N+LISMY++ G + A + F+ + ++N++S+ +I+ G+AK
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239
Query: 111 HGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
+ ++ A +F ++ G+ + T+ ++LS + G
Sbjct: 240 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
>emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 164 bits (414), Expect = 9e-39
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = -3
Query: 294 KGEQIHARLLKSGFESNQLICNALISMYSKCGNIVAAFQVFNDMEDRNIISWTSIITGFA 115
KGEQIH RLLK G++SNQ ICNALISMYS+CGNI AAFQVFN+MEDRN+ISWTS+ITGFA
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202
Query: 114 KHGLAQRAQEMFTQMLLAGVKPNDVTYVAVLSACSHAG 1
KHG A RA EMF +ML G KPN++TYVAVLSACSH G
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240