BLASTX nr result

ID: Cnidium21_contig00029398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029398
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39748.3| unnamed protein product [Vitis vinifera]              311   1e-82
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   311   1e-82
emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]   311   2e-82
ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...   310   6e-82
ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PAR...   294   3e-77

>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  311 bits (798), Expect = 1e-82
 Identities = 147/233 (63%), Positives = 182/233 (78%)
 Frame = +1

Query: 430  IKNVTKSNFDSALVQLRQHIRDADFVAIDLEMTGITSAPWRESFEFDRFDIRYLKVKDSA 609
            +KNVTKSNF+S+L  LR+H+RDADFVAIDLEMTG+TSAPWRESFEFDRFD++YLKVKDSA
Sbjct: 40   LKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSA 99

Query: 610  HKFAVVQLGVCPFRWDPSLSSFVAHPHNFFVFPRQDLPITAPSYEFMCQTASLDFLAKYH 789
             KFAVVQ GVCPFRWD S   FVAHPHNF+VFPRQ+LP+  PSYEF+CQT S+DFLAKY 
Sbjct: 100  EKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSIDFLAKYQ 159

Query: 790  FDFNTCINEGISYLSRGQEEEARRLFTSLYDNEFLESHSSSKDIKDKGIFRMADVLFTER 969
            FDFN CI EGISYLSR QE E  R   S  D+E      + K+++D  +  +ADVLF+ER
Sbjct: 160  FDFNACIYEGISYLSREQENEMLRCLNSECDDEMSLLWRNMKEVRDTPLVSVADVLFSER 219

Query: 970  IKSKISEWKNGLLQVRNGDHESQGSTKESVKQFETIFYMMRPAVKLRGFTSRQ 1128
            +K++ +EW+  LLQ R G  +   ++ +  +QF+TIF+ MRPA+ L GFT+ Q
Sbjct: 220  MKNRFNEWRKELLQDRKGGSQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQ 272


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  311 bits (798), Expect = 1e-82
 Identities = 147/233 (63%), Positives = 182/233 (78%)
 Frame = +1

Query: 430  IKNVTKSNFDSALVQLRQHIRDADFVAIDLEMTGITSAPWRESFEFDRFDIRYLKVKDSA 609
            +KNVTKSNF+S+L  LR+H+RDADFVAIDLEMTG+TSAPWRESFEFDRFD++YLKVKDSA
Sbjct: 40   LKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSA 99

Query: 610  HKFAVVQLGVCPFRWDPSLSSFVAHPHNFFVFPRQDLPITAPSYEFMCQTASLDFLAKYH 789
             KFAVVQ GVCPFRWD S   FVAHPHNF+VFPRQ+LP+  PSYEF+CQT S+DFLAKY 
Sbjct: 100  EKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSIDFLAKYQ 159

Query: 790  FDFNTCINEGISYLSRGQEEEARRLFTSLYDNEFLESHSSSKDIKDKGIFRMADVLFTER 969
            FDFN CI EGISYLSR QE E  R   S  D+E      + K+++D  +  +ADVLF+ER
Sbjct: 160  FDFNACIYEGISYLSREQENEMLRCLNSECDDEMSLLWRNMKEVRDTPLVSVADVLFSER 219

Query: 970  IKSKISEWKNGLLQVRNGDHESQGSTKESVKQFETIFYMMRPAVKLRGFTSRQ 1128
            +K++ +EW+  LLQ R G  +   ++ +  +QF+TIF+ MRPA+ L GFT+ Q
Sbjct: 220  MKNRFNEWRKELLQDRKGGSQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQ 272


>emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]
          Length = 720

 Score =  311 bits (797), Expect = 2e-82
 Identities = 146/233 (62%), Positives = 182/233 (78%)
 Frame = +1

Query: 430  IKNVTKSNFDSALVQLRQHIRDADFVAIDLEMTGITSAPWRESFEFDRFDIRYLKVKDSA 609
            +KNVTKSNF+S+L  LR+H+RDADFVAIDLEMTG+TSAPWRESFEFDRFD++YLKVKDSA
Sbjct: 40   LKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSA 99

Query: 610  HKFAVVQLGVCPFRWDPSLSSFVAHPHNFFVFPRQDLPITAPSYEFMCQTASLDFLAKYH 789
             KFAVVQ GVCPFRWD S   FVAHPHNF+VFPRQ+LP+  PSYEF+CQT S+DFLAKY 
Sbjct: 100  EKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSIDFLAKYQ 159

Query: 790  FDFNTCINEGISYLSRGQEEEARRLFTSLYDNEFLESHSSSKDIKDKGIFRMADVLFTER 969
            FDFN CI EG+SYLSR QE E  R   S  D+E      + K+++D  +  +ADVLF+ER
Sbjct: 160  FDFNACIYEGVSYLSREQENEMLRCLNSECDDEMSLLWRNMKEVRDTPLVSVADVLFSER 219

Query: 970  IKSKISEWKNGLLQVRNGDHESQGSTKESVKQFETIFYMMRPAVKLRGFTSRQ 1128
            +K++ +EW+  LLQ R G  +   ++ +  +QF+TIF+ MRPA+ L GFT+ Q
Sbjct: 220  MKNRFNEWRKELLQDRKGGSQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQ 272


>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
            predicted protein [Populus trichocarpa]
          Length = 675

 Score =  310 bits (793), Expect = 6e-82
 Identities = 144/234 (61%), Positives = 187/234 (79%), Gaps = 1/234 (0%)
 Frame = +1

Query: 430  IKNVTKSNFDSALVQLRQHIRDADFVAIDLEMTGITSAPWRESFEFDRFDIRYLKVKDSA 609
            +K+VT+SNF++A+  L+ H++ ADFVAIDLEMTG+TSAPWRES EFDRFD++YLKVKDSA
Sbjct: 27   LKHVTQSNFETAVADLKTHLKAADFVAIDLEMTGVTSAPWRESLEFDRFDVKYLKVKDSA 86

Query: 610  HKFAVVQLGVCPFRWDPSLSSFVAHPHNFFVFPRQDLPITAPSYEFMCQTASLDFLAKYH 789
             KFAVVQLGVCPFRWDP   SF+AHPHNFF+FPRQ++PI + SYEF+CQT S+DFLAKYH
Sbjct: 87   EKFAVVQLGVCPFRWDPLRLSFIAHPHNFFIFPRQEVPIDSSSYEFLCQTTSIDFLAKYH 146

Query: 790  FDFNTCINEGISYLSRGQEEEARRLFTSLYDNEFLESHSSSKDIKDKGIFRMADVLFTER 969
            FDFN CI +G+SYLSRGQE+EA RL    Y+NE       S+  +D  +  + D+LF+ER
Sbjct: 147  FDFNVCIRQGVSYLSRGQEDEALRLLNLRYENEL------SEQARDVPLVSITDILFSER 200

Query: 970  IKSKISEWKNGLLQVRNGDHESQGS-TKESVKQFETIFYMMRPAVKLRGFTSRQ 1128
            +K+++ EW++GLL+  +G  + +GS   +S +QF+ IFY MRPA+ L GFTSRQ
Sbjct: 201  MKNRLREWRDGLLKDTSGGSQLEGSFLNDSNQQFQNIFYKMRPALSLNGFTSRQ 254


>ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis sativus]
            gi|449524565|ref|XP_004169292.1| PREDICTED:
            poly(A)-specific ribonuclease PARN-like [Cucumis sativus]
          Length = 700

 Score =  294 bits (752), Expect = 3e-77
 Identities = 136/233 (58%), Positives = 177/233 (75%)
 Frame = +1

Query: 430  IKNVTKSNFDSALVQLRQHIRDADFVAIDLEMTGITSAPWRESFEFDRFDIRYLKVKDSA 609
            +KNVTKSNF++AL +LR H+R ADFVAIDLEMTGITSAPWR+  EFDRFD+RYL VKDSA
Sbjct: 41   LKNVTKSNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSA 100

Query: 610  HKFAVVQLGVCPFRWDPSLSSFVAHPHNFFVFPRQDLPITAPSYEFMCQTASLDFLAKYH 789
             KFAV+Q G+CPFRWD + +SFVAHPHNFF+FPR ++ +  PS EF+CQT S++FLAKY 
Sbjct: 101  EKFAVLQFGICPFRWDSAKNSFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQ 160

Query: 790  FDFNTCINEGISYLSRGQEEEARRLFTSLYDNEFLESHSSSKDIKDKGIFRMADVLFTER 969
            FDFN CI EGISYLSR  E+ AR+     Y +E L++ S+  ++ DK    + DVLF ER
Sbjct: 161  FDFNACIYEGISYLSRAHEDAARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKER 220

Query: 970  IKSKISEWKNGLLQVRNGDHESQGSTKESVKQFETIFYMMRPAVKLRGFTSRQ 1128
            +K+++ EW++ LL  RN + + Q  + +  +QF+TIF+ MRPA+ L  FTS Q
Sbjct: 221  MKNRLHEWRDRLLSERNMEFQGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQ 273


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