BLASTX nr result

ID: Cnidium21_contig00029396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029396
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15055.1| glutamate receptor 3.2 [Solanum lycopersicum]         231   3e-59
dbj|BAL15057.1| glutamate receptor 3.4 [Solanum lycopersicum]         229   2e-58
ref|XP_002321123.1| glutamate-gated kainate-type ion channel rec...   226   2e-57
ref|XP_004151885.1| PREDICTED: glutamate receptor 3.4-like [Cucu...   224   4e-57
ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Viti...   222   2e-56

>dbj|BAL15055.1| glutamate receptor 3.2 [Solanum lycopersicum]
          Length = 934

 Score =  231 bits (590), Expect = 3e-59
 Identities = 112/146 (76%), Positives = 122/146 (83%)
 Frame = -3

Query: 439 KPLQIAVPYRVTYKEFVTKDKGPIGVRGYCIDVFEAAVDLLPYPVPRTYILYGDGQRNPS 260
           KPL+I VPYRVT+KEFV KDKGP GV+GYCIDVFEAA+DLLPY VP  YILYGDGQRNPS
Sbjct: 479 KPLRIVVPYRVTFKEFVHKDKGPSGVKGYCIDVFEAAIDLLPYAVPHVYILYGDGQRNPS 538

Query: 259 FSDLVLDVSQHKYDAAVGDVTIVTNRTRIVDFTQPFMESGLXXXXXXXXXKSSAWAFLKP 80
           F +LV DV  +KYDAAVGDVTI TNRTRIVDFTQP+MESGL         KSSAWAFL+P
Sbjct: 539 FKNLVNDVVANKYDAAVGDVTITTNRTRIVDFTQPYMESGLVVVAPIKELKSSAWAFLQP 598

Query: 79  FSWEMWSVTGAFFLFVGAVVWILEHR 2
           F+ +MW VTG FFLFVG VVWILEHR
Sbjct: 599 FTLQMWCVTGVFFLFVGTVVWILEHR 624


>dbj|BAL15057.1| glutamate receptor 3.4 [Solanum lycopersicum]
          Length = 835

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/146 (73%), Positives = 123/146 (84%)
 Frame = -3

Query: 439 KPLQIAVPYRVTYKEFVTKDKGPIGVRGYCIDVFEAAVDLLPYPVPRTYILYGDGQRNPS 260
           KPL+IAVP+RVT++EFV KDKGP GV+GYCIDVFEAA+DLL YPVP  YILYGDG+RNPS
Sbjct: 354 KPLRIAVPFRVTFEEFVKKDKGPAGVKGYCIDVFEAAIDLLAYPVPHVYILYGDGKRNPS 413

Query: 259 FSDLVLDVSQHKYDAAVGDVTIVTNRTRIVDFTQPFMESGLXXXXXXXXXKSSAWAFLKP 80
           F+ +V DV+Q+KYDAAVGD+ I TNRTRIVDFTQP+MESGL         KSS WAFLKP
Sbjct: 414 FNSIVNDVAQNKYDAAVGDIAITTNRTRIVDFTQPYMESGLVVVAPVKETKSSPWAFLKP 473

Query: 79  FSWEMWSVTGAFFLFVGAVVWILEHR 2
           F+ +MW VTG FFLFVG VVWILEHR
Sbjct: 474 FTIQMWGVTGVFFLFVGCVVWILEHR 499


>ref|XP_002321123.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222861896|gb|EEE99438.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 927

 Score =  226 bits (575), Expect = 2e-57
 Identities = 107/146 (73%), Positives = 126/146 (86%)
 Frame = -3

Query: 439 KPLQIAVPYRVTYKEFVTKDKGPIGVRGYCIDVFEAAVDLLPYPVPRTYILYGDGQRNPS 260
           KPL+IAVP R++Y++FV KDK P GVRGYCIDVFEAA++LLPYPVPRTY+L+GDG+RNP 
Sbjct: 464 KPLRIAVPNRISYQQFVAKDKNPPGVRGYCIDVFEAAINLLPYPVPRTYMLHGDGKRNPE 523

Query: 259 FSDLVLDVSQHKYDAAVGDVTIVTNRTRIVDFTQPFMESGLXXXXXXXXXKSSAWAFLKP 80
           ++++V  V+Q +YDAAVGDVTIVTNRT+IVDFTQPFMESGL         KSS WAFLKP
Sbjct: 524 YNEIVQAVAQDRYDAAVGDVTIVTNRTKIVDFTQPFMESGLVVVAPVKEQKSSPWAFLKP 583

Query: 79  FSWEMWSVTGAFFLFVGAVVWILEHR 2
           F+ +MW VTGAFFLFVGAVVWILEHR
Sbjct: 584 FTIQMWLVTGAFFLFVGAVVWILEHR 609


>ref|XP_004151885.1| PREDICTED: glutamate receptor 3.4-like [Cucumis sativus]
          Length = 935

 Score =  224 bits (572), Expect = 4e-57
 Identities = 106/146 (72%), Positives = 122/146 (83%)
 Frame = -3

Query: 439 KPLQIAVPYRVTYKEFVTKDKGPIGVRGYCIDVFEAAVDLLPYPVPRTYILYGDGQRNPS 260
           KPLQI VP RV+YK FV KD  P+GV+GYCIDVFEAA++LLPYPVP TYILYGDG+  P 
Sbjct: 479 KPLQIVVPNRVSYKAFVAKDNNPLGVKGYCIDVFEAAINLLPYPVPHTYILYGDGKDTPE 538

Query: 259 FSDLVLDVSQHKYDAAVGDVTIVTNRTRIVDFTQPFMESGLXXXXXXXXXKSSAWAFLKP 80
           +SDLV +VSQ+KYDAAVGD+TIVTNRT+IVDFTQPFMESGL         KSS WAFL+P
Sbjct: 539 YSDLVYEVSQNKYDAAVGDITIVTNRTKIVDFTQPFMESGLVVVTVVKGEKSSPWAFLRP 598

Query: 79  FSWEMWSVTGAFFLFVGAVVWILEHR 2
           F+ +MW+VT  FF+FVGAVVWILEHR
Sbjct: 599 FTIQMWAVTALFFIFVGAVVWILEHR 624


>ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Vitis vinifera]
          Length = 911

 Score =  222 bits (566), Expect = 2e-56
 Identities = 106/146 (72%), Positives = 123/146 (84%)
 Frame = -3

Query: 439 KPLQIAVPYRVTYKEFVTKDKGPIGVRGYCIDVFEAAVDLLPYPVPRTYILYGDGQRNPS 260
           KPL+I VP RV++K+FV +DKGP+GVRGYCID+FEAAV+LLPY VP TY+LYG+G RNPS
Sbjct: 465 KPLRIGVPDRVSFKDFVARDKGPLGVRGYCIDIFEAAVNLLPYAVPHTYMLYGNGLRNPS 524

Query: 259 FSDLVLDVSQHKYDAAVGDVTIVTNRTRIVDFTQPFMESGLXXXXXXXXXKSSAWAFLKP 80
           + DLV  V  +K+DAAVGD+TIVTNRTRIVDFTQPFMESGL         KSS WAFLKP
Sbjct: 525 YDDLVSQVVGNKFDAAVGDITIVTNRTRIVDFTQPFMESGLVIVATVKETKSSPWAFLKP 584

Query: 79  FSWEMWSVTGAFFLFVGAVVWILEHR 2
           F+ +MW VTGAFF+FVGAVVWILEHR
Sbjct: 585 FTVQMWCVTGAFFIFVGAVVWILEHR 610


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