BLASTX nr result

ID: Cnidium21_contig00029386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029386
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36887.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002272154.1| PREDICTED: GTP pyrophosphokinase-like [Vitis...   125   5e-27
ref|XP_002320997.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophos...   113   1e-23
ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucum...   113   1e-23

>emb|CBI36887.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
 Frame = -2

Query: 341 KYDCSVTSCAWKAPRALTGFLATTAHS---SVSTC-GPRGRKFGNKRCESTDFGGWLSTE 174
           ++DCSV SCAWKAPR L+GFLA+TAHS   S+S+C G  GR     R E+ D GGW S E
Sbjct: 27  RHDCSVLSCAWKAPRVLSGFLASTAHSPQCSLSSCAGSGGRNRIKYRYEAHDVGGWHSHE 86

Query: 173 ASHFVSQQGVLKSSRLHHAIEKWKTCCSTSESSQTYNQVSPDSLWEELMPAISYLPP 3
           AS FV  + +++S+  H A  +WK+ CS+S SS  +++VSP+SLWE+L PAISYLPP
Sbjct: 87  ASDFVLPERLIRSNLFHVASRRWKSSCSSSFSSVAFDKVSPESLWEDLKPAISYLPP 143


>ref|XP_002272154.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
          Length = 887

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/121 (52%), Positives = 85/121 (70%), Gaps = 8/121 (6%)
 Frame = -2

Query: 341 KYDCSVTSCAWKAPRALTGFLATTAHS---SVSTCGPRGRKFGNK-----RCESTDFGGW 186
           ++DCSV SCAWKAPR L+GFLA+TAHS   S+S+C   G +   K     R E+ D GGW
Sbjct: 27  RHDCSVLSCAWKAPRVLSGFLASTAHSPQCSLSSCAGSGGRNRIKYVSWQRYEAHDVGGW 86

Query: 185 LSTEASHFVSQQGVLKSSRLHHAIEKWKTCCSTSESSQTYNQVSPDSLWEELMPAISYLP 6
            S EAS FV  + +++S+  H A  +WK+ CS+S SS  +++VSP+SLWE+L PAISYLP
Sbjct: 87  HSHEASDFVLPERLIRSNLFHVASRRWKSSCSSSFSSVAFDKVSPESLWEDLKPAISYLP 146

Query: 5   P 3
           P
Sbjct: 147 P 147


>ref|XP_002320997.1| predicted protein [Populus trichocarpa] gi|222861770|gb|EEE99312.1|
           predicted protein [Populus trichocarpa]
          Length = 892

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
 Frame = -2

Query: 347 NGKYDCSVTSCAWKAPRALTGFLATTAHSSVST----CGPRGRKFGNK-RCESTDFGGWL 183
           +G+Y+CSV SCAWKAPR LTGFLA+TAH S       CG  GR+   K RC++ D GG  
Sbjct: 26  SGRYECSVLSCAWKAPRVLTGFLASTAHPSPQCSSFLCGRNGRRKQFKSRCKAFDTGGCY 85

Query: 182 STEASHFVSQQGVLKSSRLHH-AIEKWKTCCSTSESSQTYNQVSPDSLWEELMPAISYLP 6
           S+E S F +  G    SRLHH A +KW+   S+S S+ T+N+VSP+ LWE+L P +SYL 
Sbjct: 86  SSEDSDF-ALLGRFFKSRLHHVAGKKWQLSSSSSISADTFNEVSPERLWEDLKPTVSYLS 144

Query: 5   P 3
           P
Sbjct: 145 P 145


>ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophosphokinase-like [Cucumis
           sativus]
          Length = 883

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/121 (49%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
 Frame = -2

Query: 347 NGKYDCSVTSCAWKAPRALTGFLATTAHSS------VSTCGPRGRKFGNKRCESTDFGGW 186
           +G+YDCS+ SCAWKAPR LTGFLA+T HS        S  G R R   N R ES +  GW
Sbjct: 26  SGRYDCSILSCAWKAPRVLTGFLASTTHSLHCSSFLYSKNGKRSRI--NSRFESINVRGW 83

Query: 185 LSTEASHFVSQQGVLKSSRLHHAIEKWKTCCSTSESSQTYNQVSPDSLWEELMPAISYLP 6
            S E S+ V    +LKS  LH    + K CCS+  SS  +++VSP+ LWE+L P ISYL 
Sbjct: 84  YSNEVSNHVHLGRLLKSGLLHDVCRRKKFCCSSFLSSDAFDEVSPEGLWEDLKPTISYLS 143

Query: 5   P 3
           P
Sbjct: 144 P 144


>ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
          Length = 883

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/121 (49%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
 Frame = -2

Query: 347 NGKYDCSVTSCAWKAPRALTGFLATTAHSS------VSTCGPRGRKFGNKRCESTDFGGW 186
           +G+YDCS+ SCAWKAPR LTGFLA+T HS        S  G R R   N R ES +  GW
Sbjct: 26  SGRYDCSILSCAWKAPRVLTGFLASTTHSLHCSSFLYSKNGKRSRI--NSRFESINVRGW 83

Query: 185 LSTEASHFVSQQGVLKSSRLHHAIEKWKTCCSTSESSQTYNQVSPDSLWEELMPAISYLP 6
            S E S+ V    +LKS  LH    + K CCS+  SS  +++VSP+ LWE+L P ISYL 
Sbjct: 84  YSNEVSNHVHLGRLLKSGLLHDVCRRKKFCCSSFLSSDAFDEVSPEGLWEDLKPTISYLS 143

Query: 5   P 3
           P
Sbjct: 144 P 144