BLASTX nr result

ID: Cnidium21_contig00029379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029379
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...   118   1e-24
emb|CBI26213.3| unnamed protein product [Vitis vinifera]              118   1e-24
emb|CAN75984.1| hypothetical protein VITISV_012188 [Vitis vinifera]   116   3e-24
ref|XP_002315787.1| chromatin remodeling complex subunit [Populu...   115   1e-23
ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...   106   3e-21

>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
            vinifera]
          Length = 1114

 Score =  118 bits (295), Expect = 1e-24
 Identities = 61/149 (40%), Positives = 94/149 (63%)
 Frame = +2

Query: 2    EVPDWAYAQPDPTDTKGKGFDYESANVSGKRRRKSIVYADTLSESQWIKAVEYGEPVSKH 181
            EVP+WAY+ PD  + K KGF+++++ ++GKRRRK +VYAD+LS+ QW+KAVE GE +S+ 
Sbjct: 945  EVPEWAYSTPDGKEEKSKGFEHDASKITGKRRRKEVVYADSLSDLQWMKAVESGEDISRL 1004

Query: 182  TGKRKMKEHLPPPSHPPAYNNVGGDKKLVELKSESVPIPIERTLEVTSGMHPXXXXXXXX 361
            + K K +EHLP  ++    + +GG++K++EL+SE+V +  E T E T  + P        
Sbjct: 1005 SVKGKRREHLPSEANESDSDKIGGEQKVLELRSENVSMTSEGTSEDTFSLAP------KR 1058

Query: 362  XXXEVSNSQDSEVPGSDDDSLKGHMLTWK 448
               E +NS      G    S  GH+ TW+
Sbjct: 1059 LKSEGANSDQRTGGG----SWNGHIPTWQ 1083


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  118 bits (295), Expect = 1e-24
 Identities = 61/149 (40%), Positives = 94/149 (63%)
 Frame = +2

Query: 2    EVPDWAYAQPDPTDTKGKGFDYESANVSGKRRRKSIVYADTLSESQWIKAVEYGEPVSKH 181
            EVP+WAY+ PD  + K KGF+++++ ++GKRRRK +VYAD+LS+ QW+KAVE GE +S+ 
Sbjct: 934  EVPEWAYSTPDGKEEKSKGFEHDASKITGKRRRKEVVYADSLSDLQWMKAVESGEDISRL 993

Query: 182  TGKRKMKEHLPPPSHPPAYNNVGGDKKLVELKSESVPIPIERTLEVTSGMHPXXXXXXXX 361
            + K K +EHLP  ++    + +GG++K++EL+SE+V +  E T E T  + P        
Sbjct: 994  SVKGKRREHLPSEANESDSDKIGGEQKVLELRSENVSMTSEGTSEDTFSLAP------KR 1047

Query: 362  XXXEVSNSQDSEVPGSDDDSLKGHMLTWK 448
               E +NS      G    S  GH+ TW+
Sbjct: 1048 LKSEGANSDQRTGGG----SWNGHIPTWQ 1072


>emb|CAN75984.1| hypothetical protein VITISV_012188 [Vitis vinifera]
          Length = 399

 Score =  116 bits (291), Expect = 3e-24
 Identities = 61/149 (40%), Positives = 93/149 (62%)
 Frame = +2

Query: 2   EVPDWAYAQPDPTDTKGKGFDYESANVSGKRRRKSIVYADTLSESQWIKAVEYGEPVSKH 181
           EVP+WAY+ PD  + K KGF+++++ ++GKRRRK +VYAD+LS+ QW+KAVE GE  S+ 
Sbjct: 230 EVPEWAYSTPDGKEEKSKGFEHDASKITGKRRRKEVVYADSLSDLQWMKAVESGEDXSRL 289

Query: 182 TGKRKMKEHLPPPSHPPAYNNVGGDKKLVELKSESVPIPIERTLEVTSGMHPXXXXXXXX 361
           + K K +EHLP  ++    + +GG++K++EL+SE+V +  E T E T  + P        
Sbjct: 290 SVKGKRREHLPSEANESDSDKIGGEQKVLELRSENVSMTSEGTSEDTFSLAP------KR 343

Query: 362 XXXEVSNSQDSEVPGSDDDSLKGHMLTWK 448
              E +NS      G    S  GH+ TW+
Sbjct: 344 LKSEGANSDQRTGGG----SWNGHIPTWQ 368


>ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222864827|gb|EEF01958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1132

 Score =  115 bits (287), Expect = 1e-23
 Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
 Frame = +2

Query: 2    EVPDWAYAQPDPTDTKGKGFDYESANVSGKRRRKSIVYADTLSESQWIKAVEYGEPVSKH 181
            EVP+WAY  PD  + K KGF+  S  V GKRRRK ++Y+DTLS+ QWIKAVE GE +SK 
Sbjct: 952  EVPEWAYQAPDNKEDKAKGFEQNSTGVLGKRRRKEVIYSDTLSDLQWIKAVENGEDMSKL 1011

Query: 182  TGKRKMKEHLPPPSHPPAYNNVGGDKKLVELKSESVPIPIERTLEVTSGMHPXXXXXXXX 361
            +GK K +EH    ++  A N+   DKK++E+++E  P+  E T E T    P        
Sbjct: 1012 SGKGKKQEHTRSEANDSASNSARTDKKVLEMRNEYTPVASEGTSEDTYASAP----KRPK 1067

Query: 362  XXXEVSNSQDSEV-----PGSDDDSLKGHMLTW 445
                VS   D +V      G  +  L  H+ TW
Sbjct: 1068 SDEAVSQKPDYQVSEKSEQGGGESGLNKHIFTW 1100


>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851428|gb|EEE88975.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1131

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/112 (44%), Positives = 72/112 (64%)
 Frame = +2

Query: 2    EVPDWAYAQPDPTDTKGKGFDYESANVSGKRRRKSIVYADTLSESQWIKAVEYGEPVSKH 181
            EVP+WAY  PD  + K KGF+  S  V GKRRRK + Y DTLS+ QW+KAVE G+ +SK 
Sbjct: 951  EVPEWAYQAPDSKEDKAKGFEQNSTGVLGKRRRKEVTYGDTLSDLQWMKAVENGQDISKL 1010

Query: 182  TGKRKMKEHLPPPSHPPAYNNVGGDKKLVELKSESVPIPIERTLEVTSGMHP 337
            + K K +EH     +  A N+ G +KK++E++++++P+  E T E T    P
Sbjct: 1011 SSKGKKQEHTRSEVNDTANNSAGTEKKVLEMRNDNMPVASEGTSEDTYASAP 1062


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