BLASTX nr result

ID: Cnidium21_contig00029368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029368
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38318.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_004146303.1| PREDICTED: F-box protein PP2-B10-like [Cucum...    97   2e-18
ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...    96   6e-18
gb|AFK34389.1| unknown [Medicago truncatula]                           94   2e-17
ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula] g...    94   2e-17

>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  107 bits (267), Expect = 2e-21
 Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
 Frame = +3

Query: 3   SAAKTDHVWERFLPADLISRRVKRSPSHFSIDVEDPWEKIDSDTLQAFPTKKDLYLFLSD 182
           SAA++D +WERFLPAD      + S               +S + + F +KK+LY  L D
Sbjct: 52  SAAESDALWERFLPADYREIIARSS---------------ESSSWRHFSSKKELYFTLCD 96

Query: 183 NPLIIDDGDMYFWLDKLSGNKCFYLVPEKLS-----KPEPNGWTG-------QYSYYDST 326
            PL+ID+G   FWL+K SG KC+ L   +L+      P    WT        + +Y  + 
Sbjct: 97  YPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAV 156

Query: 327 LPFRIEGKISTSLLSPNTLYTAYLCFDFTASGYFNGFGEEEALQTCVGIDGGCESESRIV 506
             F I GKI+T +LSP T Y AYL F    +G  +GF E+  +++ + I G  E+ +R++
Sbjct: 157 CWFEIRGKINTCMLSPRTNYAAYLVFH---AGRSHGF-EDVPVESSIEIVGN-ETTTRVI 211

Query: 507 YIPFMPWEYERHTNILKCRPPNMPVLSGPQYPRRRRYGCYELELGDY 647
           Y+              K   P   + S   YP++R    +E+ELG++
Sbjct: 212 YL----------ARYRKNEEPTSSIRSDLPYPKKREDSWFEIELGEF 248


>ref|XP_004146303.1| PREDICTED: F-box protein PP2-B10-like [Cucumis sativus]
          Length = 299

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 81/232 (34%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
 Frame = +3

Query: 3   SAAKTDHVWERFLPAD---LISRRVKRSPSHFSIDVEDPWEKIDSDTLQAFPTKKDLYLF 173
           +AA++D VW+ FLP D   LISRR    PS+ + D       I S       +KK ++  
Sbjct: 45  AAAQSDIVWDSFLPTDWEILISRR---KPSNLNFD------PISS-------SKKGIFFS 88

Query: 174 LSDNPLIIDDGDMYFWLDKLSGNKCFYLVPEKLS------------KPEPNGWTGQYSYY 317
           L D PLIIDDG+  F LDK SG KC  L   +LS            +P P     + +  
Sbjct: 89  LCDTPLIIDDGNKSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVL 148

Query: 318 DSTLPFRIEGKISTSLLSPNTLYTAYLCFDFTASGYFNGFGEEEALQTCVGIDGGCESES 497
            +     I+GK+S  +LSP T Y AY  F      Y+ GF    A      +DG C S S
Sbjct: 149 LNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYY-GFDIVAADAAVAIVDGECCS-S 206

Query: 498 RIVYIPFM---PWEYERHTNILKCRPPNMPVLSGPQYPRRRRYGCYELELGD 644
           R+   PF+   P +  R T  L+ R P    +S  + P+ R  G +E+ELG+
Sbjct: 207 RVCLDPFLENAPPKRRRRTPCLR-RNPLGNSMSRAKQPQERHDGWFEIELGE 257


>ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 349

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
 Frame = +3

Query: 3   SAAKTDHVWERFLPADLISRRVKRSPSHFSIDVEDPWEKIDSDTLQAFPTKKDLYLFLSD 182
           SAA++D +WERFLPAD      + S               +S + + F +KK+LY  L D
Sbjct: 52  SAAESDALWERFLPADYREIIARSS---------------ESSSWRHFSSKKELYFTLCD 96

Query: 183 NPLIIDDGDMYFWLDKLSGNKCFYLVPEKLS-----KPEPNGWTG-------QYSYYDST 326
            PL+ID+G   FWL+K SG KC+ L   +L+      P    WT        + +Y  + 
Sbjct: 97  YPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAV 156

Query: 327 LPFRIEGKISTSLLSPNTLYTAYLCFDFTASGYFNGFGEEEALQTCVGIDGGCESESRIV 506
             F I GKI+T +LSP T Y AYL F    +G  +GF E+  +++ + I G  E+ +R++
Sbjct: 157 CWFEIRGKINTCMLSPRTNYAAYLVFH---AGRSHGF-EDVPVESSIEIVGN-ETTTRVI 211

Query: 507 YI 512
           Y+
Sbjct: 212 YL 213


>gb|AFK34389.1| unknown [Medicago truncatula]
          Length = 275

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 80/230 (34%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
 Frame = +3

Query: 3   SAAKTDHVWERFLPADLISRRVKRSPSHFSIDVEDPWEKIDSDTLQAFPTKKDLYLFLSD 182
           SA+ +D VW RFLP+D IS  + + PS                 L   PTKKDLY+ LSD
Sbjct: 36  SASDSDAVWNRFLPSD-ISSIISQFPS-----------------LSNIPTKKDLYIALSD 77

Query: 183 NPLIIDDGDMYFWLDKLSGNKCFYLVPEKLSKPEPNGWTGQYSYY----DSTLP------ 332
            P+IID+G   F L++ SG KC+ L    L+     G T QY  +    +S  P      
Sbjct: 78  RPIIIDNGKKSFQLERKSGKKCYMLSARSLAITW--GDTDQYWNWTVMPESRFPEVAELL 135

Query: 333 ----FRIEGKISTSLLSPNTLYTAYLCFDFTASGYFNGFG-EEEALQTCVGIDGGCESES 497
                 I GK++T  LSPNT Y  YL F        N +G E   ++  VGI+GG  S +
Sbjct: 136 HVCWLEIRGKLNTLALSPNTRYVTYLVFKM-----INAYGFEYFPVELSVGIEGG-HSST 189

Query: 498 RIVYIPFMPWEYERHTNILKCRPPNMPVLSGPQYPRRRRYGCYELELGDY 647
           +IV +   P    RH + +    PN  +    Q P  R  G  E+E+G++
Sbjct: 190 KIVCLA-DPNARRRHRSRIIVTEPNRVLRL--QRPNVRSDGWLEIEMGEF 236


>ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479928|gb|AES61131.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 80/230 (34%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
 Frame = +3

Query: 3   SAAKTDHVWERFLPADLISRRVKRSPSHFSIDVEDPWEKIDSDTLQAFPTKKDLYLFLSD 182
           SA+ +D VW RFLP+D IS  + + PS                 L   PTKKDLY+ LSD
Sbjct: 36  SASDSDAVWNRFLPSD-ISSIISQFPS-----------------LSNIPTKKDLYIALSD 77

Query: 183 NPLIIDDGDMYFWLDKLSGNKCFYLVPEKLSKPEPNGWTGQYSYY----DSTLP------ 332
            P+IID+G   F L++ SG KC+ L    L+     G T QY  +    +S  P      
Sbjct: 78  RPIIIDNGKKSFQLERKSGKKCYMLSARSLAITW--GDTDQYWNWTVMPESRFPEVAELL 135

Query: 333 ----FRIEGKISTSLLSPNTLYTAYLCFDFTASGYFNGFG-EEEALQTCVGIDGGCESES 497
                 I GK++T  LSPNT Y  YL F        N +G E   ++  VGI+GG  S +
Sbjct: 136 HVCWLEIRGKLNTLALSPNTRYVTYLVFKM-----INAYGFEYFPVELSVGIEGG-HSST 189

Query: 498 RIVYIPFMPWEYERHTNILKCRPPNMPVLSGPQYPRRRRYGCYELELGDY 647
           +IV +   P    RH + +    PN  +    Q P  R  G  E+E+G++
Sbjct: 190 KIVCLA-DPNARRRHRSRIIVTEPNRVLRL--QRPNVRSDGWLEIEMGEF 236


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