BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029354
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612651.1| Replication factor A protein [Medicago trunc...    75   5e-11
ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicag...    75   5e-11
ref|XP_003626023.1| Replication factor A protein [Medicago trunc...    75   5e-11
ref|XP_003627854.1| Helicase-like protein [Medicago truncatula] ...    74   1e-10
ref|XP_003616287.1| Replication factor A protein [Medicago trunc...    73   2e-10

>ref|XP_003612651.1| Replication factor A protein [Medicago truncatula]
            gi|355513986|gb|AES95609.1| Replication factor A protein
            [Medicago truncatula]
          Length = 477

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
 Frame = +1

Query: 736  CEATIVDLSKHESWFYNSCPNCPRRISVEGAKFYCGRCLAHVDNYTQRYRVNVIVRDSSG 915
            C AT+ D+      +Y SCP+C + +S     F C  C   VD    RYR+ + V DS+ 
Sbjct: 281  CVATVDDILLKNGLYYVSCPHCRKTVSSTETDFNCEHCTKKVDYPKIRYRLELQVNDSTE 340

Query: 916  KTTFTLFNKEVERLIGVPILKVISEI-GQDKISNEIPPVLSNMLGRKCLFEVKANSY-NK 1089
             T F LF +  E+L  + +  +  ++  Q    +++P  L +++G K +F+VK +SY  +
Sbjct: 341  STIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQHIIGSKHIFQVKLSSYFER 400

Query: 1090 PGRDGYTVTRSLKPPQKL 1143
             G   +T  + LKP  K+
Sbjct: 401  RGVQSFTAHKILKPVVKI 418


>ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
            gi|357477581|ref|XP_003609076.1| Replication factor A 51
            kDa subunit [Medicago truncatula]
            gi|357477673|ref|XP_003609122.1| Replication factor A 51
            kDa subunit [Medicago truncatula]
            gi|355507966|gb|AES89108.1| Replication factor A 51 kDa
            subunit [Medicago truncatula] gi|355510131|gb|AES91273.1|
            Replication factor A 51 kDa subunit [Medicago truncatula]
            gi|355510177|gb|AES91319.1| Replication factor A 51 kDa
            subunit [Medicago truncatula]
          Length = 502

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
 Frame = +1

Query: 736  CEATIVDLSKHESWFYNSCPNCPRRISVEGAKFYCGRCLAHVDNYTQRYRVNVIVRDSSG 915
            C AT+ D+      +Y SCP+C + +S     F C  C   VD    RYR+ + V DS+ 
Sbjct: 313  CVATVDDILLKNGLYYVSCPHCRKTVSSTETDFNCEHCTKKVDYPKIRYRLELQVNDSTE 372

Query: 916  KTTFTLFNKEVERLIGVPILKVISEI-GQDKISNEIPPVLSNMLGRKCLFEVKANSY-NK 1089
             T F LF +  E+L  + +  +  ++  Q    +++P  L +++G K +F+VK +SY  +
Sbjct: 373  STIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQHIIGSKHIFQVKLSSYFER 432

Query: 1090 PGRDGYTVTRSLKPPQKL 1143
             G   +T  + LKP  K+
Sbjct: 433  RGVQSFTAHKILKPVVKI 450


>ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
            gi|355501038|gb|AES82241.1| Replication factor A protein
            [Medicago truncatula]
          Length = 526

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
 Frame = +1

Query: 742  ATIVDLSKHESWFYNSCPNCPRRISVEGAKFYCGRCLAHVDNYTQRYRVNVIVRDSSGKT 921
            A+I+ +    SW+Y++C  C  RI +   + +C RC     N   R++++V V D++G T
Sbjct: 293  ASIIGIEAEYSWYYDACTKCAGRIKIIAGRMFCPRC-NQSRNAVPRFKLHVQVMDNTGST 351

Query: 922  TFTLFNKEVERLIGVPILKVISEIGQDKISNEIPPVLSNMLGRKCLFEVKANSYN-KPGR 1098
            +F LF++ V   +G  +  +I   GQ       P  L  ++G+K LF+V+    N     
Sbjct: 352  SFILFDRNVSNYVGKSVQDLIDSQGQGNNDKGYPSDLDVLVGKKMLFKVEITDGNLHLSW 411

Query: 1099 DGYTVTRSLKPPQKLPQMS 1155
              Y V R+   P  + Q S
Sbjct: 412  RNYGVKRTTDDPDLISQFS 430


>ref|XP_003627854.1| Helicase-like protein [Medicago truncatula]
            gi|355521876|gb|AET02330.1| Helicase-like protein
            [Medicago truncatula]
          Length = 622

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
 Frame = +1

Query: 736  CEATIVDLSKHESWFYNSCPNCPRRISVEGAKFYCGRCLAHVDNYTQRYRVNVIVRDSSG 915
            C AT+ D+      +Y SCP+C + +S     F C  C   VD    RYR+ +   DS+ 
Sbjct: 56   CVATVDDILLKNGLYYISCPHCRKTVSSTETDFNCEYCTKKVDYLKIRYRLELPFNDSTK 115

Query: 916  KTTFTLFNKEVERLIGVPILKVISEIGQDKISNEIPPVLSNMLGRKCLFEVKANSY-NKP 1092
             T F LF +  E+L  + +  +  ++      + +P  L +++G K +F+VK +SY  + 
Sbjct: 116  STIFVLFAEVAEQLAQLKLDDLTPDLENTGRDSNLPKQLQHIIGSKHIFQVKLSSYFERR 175

Query: 1093 GRDGYTVTRSLKPPQKL 1143
            G   +T  + LKP  K+
Sbjct: 176  GIQSFTAHKILKPIVKI 192


>ref|XP_003616287.1| Replication factor A protein [Medicago truncatula]
            gi|355517622|gb|AES99245.1| Replication factor A protein
            [Medicago truncatula]
          Length = 517

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 36/110 (32%), Positives = 59/110 (53%)
 Frame = +1

Query: 742  ATIVDLSKHESWFYNSCPNCPRRISVEGAKFYCGRCLAHVDNYTQRYRVNVIVRDSSGKT 921
            ATI  L  HE W+Y +C  C R +S +   FYC  C  HV     R+RV V V D++   
Sbjct: 292  ATIGGLVDHEDWWYPAC-KCHRSVSADSGAFYCKGCAKHVFQMVPRFRVKVNVSDATNVG 350

Query: 922  TFTLFNKEVERLIGVPILKVISEIGQDKISNEIPPVLSNMLGRKCLFEVK 1071
             F +F+ +++ L+  P   ++S + + + +   PP    + G+K LF+V+
Sbjct: 351  VFVVFDGDMQNLLNTPCSSLVS-VAKAENAGHYPPEFEKLKGKKMLFKVE 399