BLASTX nr result

ID: Cnidium21_contig00029298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029298
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like...   126   2e-27
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]   125   4e-27
ref|XP_003544224.1| PREDICTED: RING-H2 finger protein ATL54-like...   114   8e-24
ref|XP_002513984.1| ring finger protein, putative [Ricinus commu...   113   2e-23
ref|XP_003615188.1| RING-H2 finger protein ATL1O [Medicago trunc...   112   5e-23

>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
          Length = 404

 Score =  126 bits (317), Expect = 2e-27
 Identities = 92/233 (39%), Positives = 117/233 (50%), Gaps = 52/233 (22%)
 Frame = +1

Query: 1   VCLTEFQDDETLRLLPKCNHAFHIPCIDTWLRSHTTCPLCRAGIV-----PNNNLNDQNS 165
           VCL+EFQ+DETLRLLPKCNHAFHIPCIDTWL SHT CPLCRA I+     P    NDQNS
Sbjct: 162 VCLSEFQEDETLRLLPKCNHAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNS 221

Query: 166 SVSGRSEESHFENVSIGGEIMDFNQVRNEIIASREVSDDGGTENCETDDQRKEIKSIEAD 345
              G +E++  EN S   E +D N VR+  +    V   G  E    DD+R   + +   
Sbjct: 222 RSLGPNEQTQMENSSNDTE-LDNNLVRSRGVYESTVGRGGTGELQILDDERTSKEGVN-- 278

Query: 346 MFSDRNGTYEVVENSSNN------LKTMKRSFSVDLNSSGDAFL---KF----------- 465
             S+ +   EV  NS+NN      ++ ++RS S+D +S+   F    KF           
Sbjct: 279 --SNGDVVLEVNGNSANNHVVDSEIQPVRRSVSMDSSSAATIFFGLAKFHADESKGNWVD 336

Query: 466 -------FDERSA-----------------SIAETL---PVRMKRSVSCSGKF 543
                  FD  S                  SIA+ L   P+ MKRS SC G+F
Sbjct: 337 ETMDGRKFDSGSVPKRDVAYTSTFRQMGSPSIAQCLHKGPISMKRSNSCGGRF 389


>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
          Length = 404

 Score =  125 bits (314), Expect = 4e-27
 Identities = 91/233 (39%), Positives = 117/233 (50%), Gaps = 52/233 (22%)
 Frame = +1

Query: 1   VCLTEFQDDETLRLLPKCNHAFHIPCIDTWLRSHTTCPLCRAGIV-----PNNNLNDQNS 165
           VCL+EFQ+DETLRLLPKCNHAFHIPCIDTWL SHT CPLCRA I+     P    NDQNS
Sbjct: 162 VCLSEFQEDETLRLLPKCNHAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNS 221

Query: 166 SVSGRSEESHFENVSIGGEIMDFNQVRNEIIASREVSDDGGTENCETDDQRKEIKSIEAD 345
              G +E++  EN S   E+ + N VR+  +    V   G  E    DD+R   + +   
Sbjct: 222 RSLGPNEQTQMENSSNDTELXN-NLVRSRGVYESTVGRGGTGELQILDDERTSKEGVN-- 278

Query: 346 MFSDRNGTYEVVENSSNN------LKTMKRSFSVDLNSSGDAFL---KF----------- 465
             S+ +   EV  NS+NN      ++ ++RS S+D +S+   F    KF           
Sbjct: 279 --SNGDVVLEVNGNSANNHVVDSEIQPVRRSVSMDSSSAATIFFGLAKFHADESKGNWVD 336

Query: 466 -------FDERSA-----------------SIAETL---PVRMKRSVSCSGKF 543
                  FD  S                  SIA+ L   P+ MKRS SC G+F
Sbjct: 337 ETMDGRKFDSGSVPKRDVAYTSTFRQMGSPSIAQCLHKGPISMKRSNSCGGRF 389


>ref|XP_003544224.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 381

 Score =  114 bits (286), Expect = 8e-24
 Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 20/200 (10%)
 Frame = +1

Query: 1   VCLTEFQDDETLRLLPKCNHAFHIPCIDTWLRSHTTCPLCRAGIVPNN---------NLN 153
           VCL EFQ++ETLRLLPKCNHAFH+PCIDTWLRSHT CPLCRAGIV N+         + +
Sbjct: 156 VCLNEFQEEETLRLLPKCNHAFHVPCIDTWLRSHTNCPLCRAGIVSNSVNSEAPAPVSNS 215

Query: 154 DQNSSVSGRSEESHFENVSIGGEIMDFNQVRNEIIASREVSDDGGTENCETDD----QRK 321
           +Q ++  GR++++  +N  I    +  N V  E   + + S+     N ET +       
Sbjct: 216 EQENANLGRNQDTLLDNSRINEGGLSSNMVAGESSEAIDESNSKDRVNDETQNNGVLMNI 275

Query: 322 EIKSIEADMFSDRNGTYEVVENSSNNLKTMKRSFSV-DLNSSGDAFLKFFDE--RSASIA 492
           EI++    + +    ++ VV++  ++  TM  + ++   +  GD +     +  R +SI 
Sbjct: 276 EIQTEMGSVSTTECESHRVVDDHKHDDDTMLHTDNLGKQDQDGDYYYSKTCKTVRRSSIE 335

Query: 493 ETL---PVRMKRSV-SCSGK 540
           E L   PV MKRS  SC+G+
Sbjct: 336 ECLHLSPVSMKRSFSSCNGR 355


>ref|XP_002513984.1| ring finger protein, putative [Ricinus communis]
           gi|223547070|gb|EEF48567.1| ring finger protein,
           putative [Ricinus communis]
          Length = 393

 Score =  113 bits (283), Expect = 2e-23
 Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 58/238 (24%)
 Frame = +1

Query: 1   VCLTEFQDDETLRLLPKCNHAFHIPCIDTWLRSHTTCPLCRAGIVP----------NNNL 150
           VCL+EFQ DETLRLLPKCNHAFHI CIDTWLRSHT CPLCRA IV           N N 
Sbjct: 153 VCLSEFQQDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAHIVHDPVPTPLISINQNP 212

Query: 151 NDQNSSVSGRSEESHFENVSIGGEIMDFNQVRNEIIASREVSDDGGTENCETDDQR---K 321
           ++ N+ +S     +  +N  I GE+ +  Q RNE   +R  +D+GG E      +R   +
Sbjct: 213 DNLNTIIS-----TQMDNSEIDGELSN-TQERNE---NRAAADEGG-ETVHVGSERTLKE 262

Query: 322 EIKSIEAD---MFSDRNGTYEVVENSSNNLKTMKRSFSVD------LNSS---------- 444
           ++ S  +D   +F D    ++V ++   +++ M+RS S+D       NSS          
Sbjct: 263 DVNSANSDNFEIFCDSGNDHQVAKS---DIQPMRRSVSMDSLTAVTTNSSLKDTTSPIDL 319

Query: 445 -----------------------GDAFLKFFDERSASIAETL---PVRMKRSVSCSGK 540
                                  G +   F    S+SI++ L   PV MKRS SCSG+
Sbjct: 320 EENSVKQIDNPEQQYSEVAWKQDGGSVRSFKQMGSSSISQHLHKSPVPMKRSFSCSGR 377


>ref|XP_003615188.1| RING-H2 finger protein ATL1O [Medicago truncatula]
           gi|355516523|gb|AES98146.1| RING-H2 finger protein ATL1O
           [Medicago truncatula]
          Length = 352

 Score =  112 bits (279), Expect = 5e-23
 Identities = 72/177 (40%), Positives = 94/177 (53%), Gaps = 21/177 (11%)
 Frame = +1

Query: 1   VCLTEFQDDETLRLLPKCNHAFHIPCIDTWLRSHTTCPLCRAGIVPNNNL-------NDQ 159
           VCL EF +DETLRLLPKC+HAFHI CIDTWLRSHT CPLCRAGIV NN         ++Q
Sbjct: 156 VCLNEFHEDETLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAGIVSNNVTPEVTIPNSEQ 215

Query: 160 NSSVSGRSEESHFENVSIGGE-IMDFNQVRNEIIASR-----EVSDDGGTENCETDD--- 312
            +++ GR++E+H EN     E ++  N V N    +R     E SD+   +    DD   
Sbjct: 216 ENNILGRNQETHLENPRNDQEDVLSNNIVINVTFETRVETTGESSDESNYKEQIIDDPTV 275

Query: 313 QRKEIKSIEADMFSDRNGTYEVVE-----NSSNNLKTMKRSFSVDLNSSGDAFLKFF 468
              EI+ IE  + S   G+Y  +         N+  T +      L+    A  KFF
Sbjct: 276 TNDEIQ-IEMGLVSTEPGSYHQISPWKLITEKNSKSTRRSPIEERLHVKPIAMKKFF 331


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