BLASTX nr result

ID: Cnidium21_contig00029284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029284
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...   129   3e-28
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   129   3e-28
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              129   3e-28
emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]   129   3e-28
ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/106 (61%), Positives = 83/106 (78%)
 Frame = +1

Query: 4    ILDCLKVSLYDEKFAVHETSTKALRRLLIHQTLSEPLITNAYSKIIPSIVSAMHDDSSEV 183
            ++ CLK +L DEKF V ETSTKAL RLL+H+  S+P  T A+  ++  +VSA+ DDSSEV
Sbjct: 2305 VVYCLKDNLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEV 2364

Query: 184  RRRALSVSKSVAKANPTVTMTYITVFNPSLADCLMDSSTPVRLAAE 321
            RRRALS  K+VAKANP+  MT+IT+F P+LA+CL D +TPVRLAAE
Sbjct: 2365 RRRALSALKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAE 2410


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/106 (61%), Positives = 83/106 (78%)
 Frame = +1

Query: 4    ILDCLKVSLYDEKFAVHETSTKALRRLLIHQTLSEPLITNAYSKIIPSIVSAMHDDSSEV 183
            ++ CLK +L DEKF V ETSTKAL RLL+H+  S+P  T A+  ++  +VSA+ DDSSEV
Sbjct: 2457 VVYCLKDNLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEV 2516

Query: 184  RRRALSVSKSVAKANPTVTMTYITVFNPSLADCLMDSSTPVRLAAE 321
            RRRALS  K+VAKANP+  MT+IT+F P+LA+CL D +TPVRLAAE
Sbjct: 2517 RRRALSALKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAE 2562


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/106 (61%), Positives = 83/106 (78%)
 Frame = +1

Query: 4    ILDCLKVSLYDEKFAVHETSTKALRRLLIHQTLSEPLITNAYSKIIPSIVSAMHDDSSEV 183
            ++ CLK +L DEKF V ETSTKAL RLL+H+  S+P  T A+  ++  +VSA+ DDSSEV
Sbjct: 2480 VVYCLKDNLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEV 2539

Query: 184  RRRALSVSKSVAKANPTVTMTYITVFNPSLADCLMDSSTPVRLAAE 321
            RRRALS  K+VAKANP+  MT+IT+F P+LA+CL D +TPVRLAAE
Sbjct: 2540 RRRALSALKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAE 2585


>emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]
          Length = 720

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/106 (61%), Positives = 83/106 (78%)
 Frame = +1

Query: 4   ILDCLKVSLYDEKFAVHETSTKALRRLLIHQTLSEPLITNAYSKIIPSIVSAMHDDSSEV 183
           ++ CLK +L DEKF V ETSTKAL RLL+H+  S+P  T A+  ++  +VSA+ DDSSEV
Sbjct: 564 VVYCLKDNLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEV 623

Query: 184 RRRALSVSKSVAKANPTVTMTYITVFNPSLADCLMDSSTPVRLAAE 321
           RRRALS  K+VAKANP+  MT+IT+F P+LA+CL D +TPVRLAAE
Sbjct: 624 RRRALSALKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAE 669


>ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|222862668|gb|EEF00175.1|
            predicted protein [Populus trichocarpa]
          Length = 865

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/106 (60%), Positives = 80/106 (75%)
 Frame = +1

Query: 4    ILDCLKVSLYDEKFAVHETSTKALRRLLIHQTLSEPLITNAYSKIIPSIVSAMHDDSSEV 183
            I+ CLK +L DEKF + ETSTKAL RL++HQ  S+P    AY  II +IVSA+HDDSSEV
Sbjct: 709  IMRCLKDALKDEKFPLRETSTKALGRLILHQIQSDPSEATAYVDIISTIVSALHDDSSEV 768

Query: 184  RRRALSVSKSVAKANPTVTMTYITVFNPSLADCLMDSSTPVRLAAE 321
            RRR LS  K+VAKA+P     ++++  P+LA+CL DSSTPVRLAAE
Sbjct: 769  RRRGLSALKAVAKASPPSITVHVSIIGPALAECLKDSSTPVRLAAE 814


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