BLASTX nr result
ID: Cnidium21_contig00029271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00029271 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 147 9e-34 gb|ABF94034.1| retrotransposon protein, putative, unclassified [... 145 3e-33 ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 144 1e-32 gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 142 4e-32 emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group] 138 4e-31 >gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group] Length = 1427 Score = 147 bits (371), Expect = 9e-34 Identities = 73/133 (54%), Positives = 94/133 (70%) Frame = -2 Query: 401 RPTKMHLEAVKRIMRYVKGTIHYGLVYSEDSRNNVLNGFCDSDLAGHLDDRRSTSGMVFY 222 RPT MHL+AVK I+RY+KGT+ GLV++ S + + GF DSDLAG +DDRRST GM FY Sbjct: 1233 RPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFY 1292 Query: 221 LNESVITWVSQKQRCVALSSCEXXXXXXXXXXXXAVWLRNVLSQITSELIGPVKICIDNR 42 +N S+++W SQKQ+ VALSSCE A+WLR +LS++ PVK+ +DN+ Sbjct: 1293 VNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKPVKLFVDNK 1352 Query: 41 SAIDLAKNPVFHG 3 SAI L KNPVFHG Sbjct: 1353 SAIALMKNPVFHG 1365 >gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1409 Score = 145 bits (367), Expect = 3e-33 Identities = 72/133 (54%), Positives = 93/133 (69%) Frame = -2 Query: 401 RPTKMHLEAVKRIMRYVKGTIHYGLVYSEDSRNNVLNGFCDSDLAGHLDDRRSTSGMVFY 222 RPT MH +AVK+I+RY+KGT+ YGLVY+ + + G+ DSDLAG LDDRRST GM FY Sbjct: 1215 RPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFY 1274 Query: 221 LNESVITWVSQKQRCVALSSCEXXXXXXXXXXXXAVWLRNVLSQITSELIGPVKICIDNR 42 +N+S++ W SQKQ+ VALSSCE A+WLR +L+++ VK+ +DNR Sbjct: 1275 INQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNR 1334 Query: 41 SAIDLAKNPVFHG 3 SAI L KNPVFHG Sbjct: 1335 SAIALMKNPVFHG 1347 >ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1427 Score = 144 bits (362), Expect = 1e-32 Identities = 72/133 (54%), Positives = 93/133 (69%) Frame = -2 Query: 401 RPTKMHLEAVKRIMRYVKGTIHYGLVYSEDSRNNVLNGFCDSDLAGHLDDRRSTSGMVFY 222 RPT MHL+AVK I+RY+KGT+ GLV++ S + + GF DSDLAG +DDRRST GM FY Sbjct: 1233 RPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFY 1292 Query: 221 LNESVITWVSQKQRCVALSSCEXXXXXXXXXXXXAVWLRNVLSQITSELIGPVKICIDNR 42 +N S+++W SQKQ+ VALSSCE A+WLR +LS++ VK+ +DN+ Sbjct: 1293 VNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKRVKLFVDNK 1352 Query: 41 SAIDLAKNPVFHG 3 SAI L KNPVFHG Sbjct: 1353 SAIALMKNPVFHG 1365 >gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group] gi|108710383|gb|ABF98178.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1339 Score = 142 bits (357), Expect = 4e-32 Identities = 72/133 (54%), Positives = 92/133 (69%) Frame = -2 Query: 401 RPTKMHLEAVKRIMRYVKGTIHYGLVYSEDSRNNVLNGFCDSDLAGHLDDRRSTSGMVFY 222 RPT MH +AVK+I+RY+KGTI+ GL++S + + GF DSDLAG DDRRSTSGM FY Sbjct: 1148 RPTVMHFKAVKQILRYLKGTINCGLMFSGGNGAVEITGFTDSDLAGDSDDRRSTSGMAFY 1207 Query: 221 LNESVITWVSQKQRCVALSSCEXXXXXXXXXXXXAVWLRNVLSQITSELIGPVKICIDNR 42 N S+++W SQKQ+ VALSSCE A+WLR +L ++ PVK+ +DN+ Sbjct: 1208 FNGSLVSWSSQKQKTVALSSCEAEFMAATAAACHALWLRGLLIEMIGAEARPVKLYVDNK 1267 Query: 41 SAIDLAKNPVFHG 3 SAI L KNPVFHG Sbjct: 1268 SAIALMKNPVFHG 1280 >emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group] Length = 346 Score = 138 bits (348), Expect = 4e-31 Identities = 70/133 (52%), Positives = 91/133 (68%) Frame = -2 Query: 401 RPTKMHLEAVKRIMRYVKGTIHYGLVYSEDSRNNVLNGFCDSDLAGHLDDRRSTSGMVFY 222 RPT MH +A+K+I+RY+KGTI+ GL++S + + GF DSDLAG DD RSTSGM FY Sbjct: 155 RPTVMHFKALKQILRYLKGTINCGLMFSGGNGAVEITGFTDSDLAGDSDDSRSTSGMAFY 214 Query: 221 LNESVITWVSQKQRCVALSSCEXXXXXXXXXXXXAVWLRNVLSQITSELIGPVKICIDNR 42 N S+++W SQKQ+ VALSSCE A+WLR +L ++ PVK+ +DN+ Sbjct: 215 FNGSLVSWSSQKQKTVALSSCEAEFMAATAAACHALWLRGLLIEMIGAEARPVKLYVDNK 274 Query: 41 SAIDLAKNPVFHG 3 SAI L KNPVFHG Sbjct: 275 SAIALMKNPVFHG 287