BLASTX nr result

ID: Cnidium21_contig00029266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029266
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   155   2e-36
emb|CBI24130.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003595922.1| Nuclear-pore anchor [Medicago truncatula] gi...   140   8e-32
ref|NP_001185436.1| nucleoprotein TPR [Arabidopsis thaliana] gi|...   139   2e-31

>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/103 (74%), Positives = 91/103 (88%)
 Frame = +3

Query: 3    LKQEKETLMNSEKRASDEVRSLSERVHRLQVTLETIQSAEEVREEARGIERRKQEEYIKR 182
            LK EKE L NSEKRASDEVRSLSERVHRLQ TL+TI S EE REEAR +ERRKQEE+I++
Sbjct: 789  LKHEKEMLSNSEKRASDEVRSLSERVHRLQATLDTIHSTEEFREEARTVERRKQEEHIRQ 848

Query: 183  IEKEWAEAKKDLQQERDNARTLRLEREGSLSSAMKQVEDMGKE 311
            IE+EWAEAKK+LQ+ERDN RTL L+RE ++ +AM+QVE+MGKE
Sbjct: 849  IEREWAEAKKELQEERDNVRTLTLDREQTIKNAMRQVEEMGKE 891


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/103 (74%), Positives = 91/103 (88%)
 Frame = +3

Query: 3    LKQEKETLMNSEKRASDEVRSLSERVHRLQVTLETIQSAEEVREEARGIERRKQEEYIKR 182
            LK EKE L NSEKRASDEVRSLSERVHRLQ TL+TI S EE REEAR +ERRKQEE+I++
Sbjct: 789  LKHEKEMLSNSEKRASDEVRSLSERVHRLQATLDTIHSTEEFREEARTVERRKQEEHIRQ 848

Query: 183  IEKEWAEAKKDLQQERDNARTLRLEREGSLSSAMKQVEDMGKE 311
            IE+EWAEAKK+LQ+ERDN RTL L+RE ++ +AM+QVE+MGKE
Sbjct: 849  IEREWAEAKKELQEERDNVRTLTLDREQTIKNAMRQVEEMGKE 891


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
            predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/103 (70%), Positives = 88/103 (85%)
 Frame = +3

Query: 3    LKQEKETLMNSEKRASDEVRSLSERVHRLQVTLETIQSAEEVREEARGIERRKQEEYIKR 182
            LK EKE L N+EKRA +EVRSLSERV+RLQ TL+TIQSAEE REEAR  E+RKQEEY+K+
Sbjct: 789  LKLEKEILSNAEKRACEEVRSLSERVYRLQATLDTIQSAEEAREEARAAEKRKQEEYVKK 848

Query: 183  IEKEWAEAKKDLQQERDNARTLRLEREGSLSSAMKQVEDMGKE 311
            IE+EW EAKK+LQQERDN R L  +RE +L +AM+Q++DMGKE
Sbjct: 849  IEREWTEAKKELQQERDNVRALTSDREQTLKNAMRQIDDMGKE 891


>ref|XP_003595922.1| Nuclear-pore anchor [Medicago truncatula] gi|355484970|gb|AES66173.1|
            Nuclear-pore anchor [Medicago truncatula]
          Length = 2288

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/103 (67%), Positives = 88/103 (85%)
 Frame = +3

Query: 3    LKQEKETLMNSEKRASDEVRSLSERVHRLQVTLETIQSAEEVREEARGIERRKQEEYIKR 182
            LK EKE L N+EKRASDEVR+LSERV+RLQ TL TIQSAEEVREEAR  ER KQEE+ K+
Sbjct: 945  LKNEKEVLSNAEKRASDEVRNLSERVYRLQATLGTIQSAEEVREEARVAERVKQEEHTKQ 1004

Query: 183  IEKEWAEAKKDLQQERDNARTLRLEREGSLSSAMKQVEDMGKE 311
            +E+EWAEAKK+LQ+ER+N R L L+R+ ++ ++++QVEDM KE
Sbjct: 1005 LEREWAEAKKELQEERENVRRLALDRDQTMKNSLRQVEDMSKE 1047


>ref|NP_001185436.1| nucleoprotein TPR [Arabidopsis thaliana] gi|332198107|gb|AEE36228.1|
            nucleoprotein TPR [Arabidopsis thaliana]
          Length = 2115

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/103 (66%), Positives = 87/103 (84%)
 Frame = +3

Query: 3    LKQEKETLMNSEKRASDEVRSLSERVHRLQVTLETIQSAEEVREEARGIERRKQEEYIKR 182
            LKQEKE L N+EKRASDEV +LS+RV+RLQ TL+T+QS EEVREE R  ERRKQEE+IK+
Sbjct: 789  LKQEKELLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREETRAAERRKQEEHIKQ 848

Query: 183  IEKEWAEAKKDLQQERDNARTLRLEREGSLSSAMKQVEDMGKE 311
            +++EWAEAKK+LQ+ER NAR    +R  +L++A+ QVE+MGKE
Sbjct: 849  LQREWAEAKKELQEERSNARDFTSDRNQTLNNAVMQVEEMGKE 891


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