BLASTX nr result
ID: Cnidium21_contig00029259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00029259
(896 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi... 384 e-104
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi... 381 e-103
emb|CBI27495.3| unnamed protein product [Vitis vinifera] 370 e-100
ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containi... 369 e-100
ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containi... 366 4e-99
>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 384 bits (987), Expect = e-104
Identities = 190/299 (63%), Positives = 237/299 (79%), Gaps = 1/299 (0%)
Frame = -2
Query: 895 EDFEKFRVFPDSSTCCKLISSCIRARKFKLVNKFIDVLKSGDDCEGIVVLAFETAMRGYN 716
EDF+ F D CC+LISSCIRARKF++ ++V DD + +L F +AM GYN
Sbjct: 141 EDFKSFDAQLDGDICCRLISSCIRARKFRITESLLEVFSYNDD---VALLVFNSAMGGYN 197
Query: 715 KLHMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFE-KKVDWTPF 539
KLHM++STI +Y+ MKSAG++ + Y +IMEAY+K + +KVV LFQEFE +K+D +PF
Sbjct: 198 KLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPF 257
Query: 538 LPQIYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELM 359
QIYRILCESLGK GRAFEALEFFRDMTKKG EDS+ YSSLIC+FA+I++VK+AEEL
Sbjct: 258 STQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELF 317
Query: 358 IEAEGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKK 179
EAE KK+L+D +LKL+LMY+E+G+ME+TLE+ MK + I VSDCIFCAIVNG++KK
Sbjct: 318 REAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKK 377
Query: 178 RGLNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKGLYKCVVA 2
RGL KVY++LIL+GCEPGQVTYASIINVYCR+ L+SKAE VFSEME+KG KCVVA
Sbjct: 378 RGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVA 436
Score = 72.0 bits (175), Expect = 2e-10
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 2/279 (0%)
Frame = -2
Query: 886 EKFRVFPDSSTCCKLISSCIRARKFKLVNKFIDVLKSGDDCE-GIVVLAFETAMRGYNKL 710
E+ ++ D KL+ + L+ + ++++K+ + E + F + G+ K
Sbjct: 321 EEKKILRDPEVFLKLVLMYVEEG---LMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKK 377
Query: 709 HMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFEKKVDWTPFLPQ 530
+ +Y+++ G Y I+ Y + K +F E EKK +
Sbjct: 378 RGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVA- 436
Query: 529 IYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMIEA 350
Y + GK+GR EA+ M ++G + Y+SL+ +K+++ E+L E
Sbjct: 437 -YSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEM 495
Query: 349 EGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNG-YSKKRG 173
+ KK++ D+ +Y +I Y + G E + RMN V D + I+ G +SK
Sbjct: 496 KRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF-RMNGGVIDRVIAGIMVGIFSKSGR 554
Query: 172 LNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKA 56
+++ +K+ +D+ EG + Y S +N GL +A
Sbjct: 555 VDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQA 593
>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 381 bits (978), Expect = e-103
Identities = 188/299 (62%), Positives = 237/299 (79%), Gaps = 1/299 (0%)
Frame = -2
Query: 895 EDFEKFRVFPDSSTCCKLISSCIRARKFKLVNKFIDVLKSGDDCEGIVVLAFETAMRGYN 716
EDF+ F V D CC+LISSCIRARKF++ ++V DD + +L +AM GYN
Sbjct: 142 EDFKSFDVQLDGDICCRLISSCIRARKFRITESLLEVFSYNDD---VALLVCNSAMGGYN 198
Query: 715 KLHMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFE-KKVDWTPF 539
KLHM++STI +Y+ MKSAG++ + Y +IMEAY+K + +KVV LFQEFE +K+D +PF
Sbjct: 199 KLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPF 258
Query: 538 LPQIYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELM 359
QIYRILCESLGK GRAFEALEFFRDMTKKG EDS+ YSSLIC+FA+I++VK+AEEL
Sbjct: 259 STQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELF 318
Query: 358 IEAEGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKK 179
EAE KK+L+D +LKL+LMY+E+G+ME+T+E+ MK + I VSDCIFCAIVNG++KK
Sbjct: 319 REAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKK 378
Query: 178 RGLNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKGLYKCVVA 2
RGL KVY++LIL+GCEPGQVTYASIINVYCR+ L+SKAE +FSEME+KG KCVVA
Sbjct: 379 RGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVA 437
Score = 72.4 bits (176), Expect = 1e-10
Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 5/292 (1%)
Frame = -2
Query: 886 EKFRVFPDSSTCCKLISSCIRA----RKFKLVNKFIDVLKSGDDCEGIVVLAFETAMRGY 719
E+ ++ D KL+ + R ++V +V DC F + G+
Sbjct: 322 EEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDC------IFCAIVNGF 375
Query: 718 NKLHMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFEKKVDWTPF 539
K + +Y+++ G Y I+ Y + K +F E EKK
Sbjct: 376 AKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCV 435
Query: 538 LPQIYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELM 359
+ Y + GK+GR EA+ M ++G + Y+SL+ +K+++ E+L
Sbjct: 436 VA--YSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLW 493
Query: 358 IEAEGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNG-YSK 182
E + KK++ D+ +Y +I Y + G E + RMN V D + I+ G +SK
Sbjct: 494 KEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF-RMNGGVIDRVIAGIMVGIFSK 552
Query: 181 KRGLNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERK 26
+++ +K+ +D+ EG + Y S +N GL +A + + K
Sbjct: 553 SGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESFDTK 604
>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 370 bits (950), Expect = e-100
Identities = 186/293 (63%), Positives = 232/293 (79%), Gaps = 4/293 (1%)
Frame = -2
Query: 868 PDSSTC---CKLISSCIRARKFKLVNKFIDVLKSGDDCEGIVVLAFETAMRGYNKLHMYT 698
PD T +LISSCIRARKF++ ++V DD + +L F +AM GYNKLHM++
Sbjct: 85 PDKETLERIIRLISSCIRARKFRITESLLEVFSYNDD---VALLVFNSAMGGYNKLHMFS 141
Query: 697 STIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFE-KKVDWTPFLPQIYR 521
STI +Y+ MKSAG++ + Y +IMEAY+K + +KVV LFQEFE +K+D +PF QIYR
Sbjct: 142 STIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYR 201
Query: 520 ILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMIEAEGK 341
ILCESLGK GRAFEALEFFRDMTKKG EDS+ YSSLIC+FA+I++VK+AEEL EAE K
Sbjct: 202 ILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEK 261
Query: 340 KLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKKRGLNDT 161
K+L+D +LKL+LMY+E+G+ME+TLE+ MK + I VSDCIFCAIVNG++KKRGL
Sbjct: 262 KILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAA 321
Query: 160 IKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKGLYKCVVA 2
KVY++LIL+GCEPGQVTYASIINVYCR+ L+SKAE VFSEME+KG KCVVA
Sbjct: 322 AKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVA 374
Score = 72.0 bits (175), Expect = 2e-10
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 2/279 (0%)
Frame = -2
Query: 886 EKFRVFPDSSTCCKLISSCIRARKFKLVNKFIDVLKSGDDCE-GIVVLAFETAMRGYNKL 710
E+ ++ D KL+ + L+ + ++++K+ + E + F + G+ K
Sbjct: 259 EEKKILRDPEVFLKLVLMYVEEG---LMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKK 315
Query: 709 HMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFEKKVDWTPFLPQ 530
+ +Y+++ G Y I+ Y + K +F E EKK +
Sbjct: 316 RGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVA- 374
Query: 529 IYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMIEA 350
Y + GK+GR EA+ M ++G + Y+SL+ +K+++ E+L E
Sbjct: 375 -YSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEM 433
Query: 349 EGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNG-YSKKRG 173
+ KK++ D+ +Y +I Y + G E + RMN V D + I+ G +SK
Sbjct: 434 KRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF-RMNGGVIDRVIAGIMVGIFSKSGR 492
Query: 172 LNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKA 56
+++ +K+ +D+ EG + Y S +N GL +A
Sbjct: 493 VDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQA 531
>ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 369 bits (946), Expect = e-100
Identities = 179/298 (60%), Positives = 227/298 (76%), Gaps = 1/298 (0%)
Frame = -2
Query: 892 DFEKFRVFPDSSTCCKLISSCIRARKFKLVNKFIDVLKSGDDCEGIVVLAFETAMRGYNK 713
DF F V PD TC KL+SSC+R RKFK+V ++V + G+ + AFE AMRGYNK
Sbjct: 143 DFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLEVFERNS---GVAMTAFEAAMRGYNK 199
Query: 712 LHMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFEKKV-DWTPFL 536
LHM+ STI++++ +KSA I D GCYC++MEAY+K G++++V+ LF E E ++ D TPF
Sbjct: 200 LHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFS 259
Query: 535 PQIYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMI 356
+IY ILCESL KSGR FE+LEFFRDM KKG ED + YS+LIC FA+I++VK+AE+L
Sbjct: 260 TKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYN 319
Query: 355 EAEGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKKR 176
EA+ KKLL+D A +LKLILMY++QG +EK LE+ VMK I VSDCIFCAIVNGY+ +R
Sbjct: 320 EAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRR 379
Query: 175 GLNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKGLYKCVVA 2
G +KVYE LI +GCEPGQVTYAS IN YCR+GL+SKAE++F EME KG KCVVA
Sbjct: 380 GYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVA 437
Score = 67.8 bits (164), Expect = 3e-09
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Frame = -2
Query: 685 MYEDMKSAGILLDPGCYCQIMEAYMKTGNNDK---VVALFQEFEKKVDWTPFLPQIYRIL 515
+Y + K+ +L DP + +++ Y++ G+ +K +V + ++F+ V F +
Sbjct: 317 LYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYA 376
Query: 514 CESLGKSGRAFEA-LEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMIEAEGKK 338
R +EA ++ + + + G Y+S I A+ + AE++ E E K
Sbjct: 377 TR------RGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKG 430
Query: 337 LLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKKRGLNDTI 158
K Y LI MY + G ++ + + A MK + I+ ++ + K + L
Sbjct: 431 FDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVE 490
Query: 157 KVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKG 23
K+++++ + P +V+Y SII+ Y + K E+ + E G
Sbjct: 491 KLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNG 535
>ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 366 bits (939), Expect = 4e-99
Identities = 178/298 (59%), Positives = 226/298 (75%), Gaps = 1/298 (0%)
Frame = -2
Query: 892 DFEKFRVFPDSSTCCKLISSCIRARKFKLVNKFIDVLKSGDDCEGIVVLAFETAMRGYNK 713
DF F V PD TC KL+SSC+R RKFK+V ++V + G+ + AFE AMRGYNK
Sbjct: 143 DFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLEVFERDS---GVAMTAFEAAMRGYNK 199
Query: 712 LHMYTSTIVMYEDMKSAGILLDPGCYCQIMEAYMKTGNNDKVVALFQEFEKKVDW-TPFL 536
LHM+ STI++++ +KSA I D GCYC++MEAY+K G++++V+ LF E E ++ TPF
Sbjct: 200 LHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISVSTPFS 259
Query: 535 PQIYRILCESLGKSGRAFEALEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMI 356
+IY ILCESL KSGR FE+LEFFRDM KKG ED + YS+LIC FA+I++VK+AE+L
Sbjct: 260 TKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYN 319
Query: 355 EAEGKKLLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKKR 176
EA+ KKLL+D A +LKLILMY++QG +EK LE+ VMK I VSDCIFCAIVNGY+ +R
Sbjct: 320 EAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRR 379
Query: 175 GLNDTIKVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKGLYKCVVA 2
G +KVYE LI +GCEPGQVTYAS IN YCR+GL+SKAE++F EME KG KCVVA
Sbjct: 380 GYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVA 437
Score = 67.8 bits (164), Expect = 3e-09
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Frame = -2
Query: 685 MYEDMKSAGILLDPGCYCQIMEAYMKTGNNDK---VVALFQEFEKKVDWTPFLPQIYRIL 515
+Y + K+ +L DP + +++ Y++ G+ +K +V + ++F+ V F +
Sbjct: 317 LYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYA 376
Query: 514 CESLGKSGRAFEA-LEFFRDMTKKGFPEDSSFYSSLICAFANIKDVKMAEELMIEAEGKK 338
R +EA ++ + + + G Y+S I A+ + AE++ E E K
Sbjct: 377 TR------RGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKG 430
Query: 337 LLKDQATYLKLILMYIEQGIMEKTLEVAAVMKRMNINVSDCIFCAIVNGYSKKRGLNDTI 158
K Y LI MY + G ++ + + A MK + I+ ++ + K + L
Sbjct: 431 FDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVE 490
Query: 157 KVYEDLILEGCEPGQVTYASIINVYCRLGLHSKAEEVFSEMERKG 23
K+++++ + P +V+Y SII+ Y + K E+ + E G
Sbjct: 491 KLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNG 535