BLASTX nr result

ID: Cnidium21_contig00029257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029257
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co...   121   5e-26
gb|ADN34046.1| SNF5-like protein BSH [Cucumis melo subsp. melo]       121   5e-26
ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co...   119   2e-25
ref|XP_002519347.1| snf5, putative [Ricinus communis] gi|2235416...   117   1e-24
ref|NP_001241294.1| chromatin structure-remodeling complex prote...   113   2e-23

>ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like
           [Cucumis sativus] gi|449498785|ref|XP_004160633.1|
           PREDICTED: chromatin structure-remodeling complex
           protein BSH-like [Cucumis sativus]
          Length = 240

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/77 (75%), Positives = 68/77 (88%)
 Frame = +3

Query: 6   AIREQLYETAVQNVSSARESRIIKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSNVIRKRK 185
           AIREQLYE AVQNV+SARESR+ KKGRRGFEH   SK GG  +DL+KL+G RS+V+RKRK
Sbjct: 152 AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRK 211

Query: 186 EWDVYEPIVDILSNEEV 236
           +WD+YEPIVD+LSNEEV
Sbjct: 212 DWDIYEPIVDLLSNEEV 228


>gb|ADN34046.1| SNF5-like protein BSH [Cucumis melo subsp. melo]
          Length = 149

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/77 (75%), Positives = 68/77 (88%)
 Frame = +3

Query: 6   AIREQLYETAVQNVSSARESRIIKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSNVIRKRK 185
           AIREQLYE AVQNV+SARESR+ KKGRRGFEH   SK GG  +DL+KL+G RS+V+RKRK
Sbjct: 61  AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRK 120

Query: 186 EWDVYEPIVDILSNEEV 236
           +WD+YEPIVD+LSNEEV
Sbjct: 121 DWDIYEPIVDLLSNEEV 137


>ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH
           [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed
           protein product [Vitis vinifera]
          Length = 243

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/77 (76%), Positives = 68/77 (88%)
 Frame = +3

Query: 6   AIREQLYETAVQNVSSARESRIIKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSNVIRKRK 185
           AIREQLYE A+Q+V+SARE+RI KKGRRG EH   SKA GT LDLMKL+G +S++IRKR+
Sbjct: 152 AIREQLYEIAIQSVTSARETRISKKGRRGAEHIPASKASGTALDLMKLFGNKSSIIRKRR 211

Query: 186 EWDVYEPIVDILSNEEV 236
           EWDVYEPIVDILSNEEV
Sbjct: 212 EWDVYEPIVDILSNEEV 228


>ref|XP_002519347.1| snf5, putative [Ricinus communis] gi|223541662|gb|EEF43211.1| snf5,
           putative [Ricinus communis]
          Length = 241

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +3

Query: 3   FAIREQLYETAVQNVSSARESRIIKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSNVIRKR 182
           FAIREQLYE A Q+V++ARESR+ KKGRRGFE+   SKAGGT  DLMKL+  R ++IRKR
Sbjct: 152 FAIREQLYEIATQSVATARESRLTKKGRRGFEYIPASKAGGTASDLMKLFSNRYSMIRKR 211

Query: 183 KEWDVYEPIVDILSNEEV 236
           KEWDVYEPIVD+LSNEEV
Sbjct: 212 KEWDVYEPIVDLLSNEEV 229


>ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine
           max] gi|296932945|gb|ADH93593.1| SNF5-type
           chromatin-remodeling complex protein [Glycine max]
           gi|297179845|gb|ADI23919.1| SNF5 [Glycine max]
          Length = 240

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/78 (70%), Positives = 67/78 (85%)
 Frame = +3

Query: 3   FAIREQLYETAVQNVSSARESRIIKKGRRGFEHSLPSKAGGTGLDLMKLYGFRSNVIRKR 182
           FAIREQLYE A+Q+V SARESR+ KKGRRG E++  SK G   +DL+KL+G +S+V+RKR
Sbjct: 151 FAIREQLYEIAIQSVVSARESRMSKKGRRGAEYTPVSKGGAAAVDLVKLFGPKSSVVRKR 210

Query: 183 KEWDVYEPIVDILSNEEV 236
           KEWDVYEPIVD+LSNEEV
Sbjct: 211 KEWDVYEPIVDLLSNEEV 228