BLASTX nr result

ID: Cnidium21_contig00029252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029252
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514876.1| transcription factor, putative [Ricinus comm...   118   2e-24
ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23
ref|XP_002304668.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...    95   2e-17
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...    93   6e-17

>ref|XP_002514876.1| transcription factor, putative [Ricinus communis]
           gi|223545927|gb|EEF47430.1| transcription factor,
           putative [Ricinus communis]
          Length = 302

 Score =  118 bits (295), Expect = 2e-24
 Identities = 71/161 (44%), Positives = 96/161 (59%), Gaps = 25/161 (15%)
 Frame = +2

Query: 2   SVSATLHSRLDQLGQS-----RANWNAVNGNFGRSSV---FWPS-LAGFGSGYVPNSSFQ 154
           SVSA LHS+++ +G S     RANW  +N N GR +V    WPS + G G+GY+ NSS  
Sbjct: 141 SVSAGLHSKMEGIGPSVGSRDRANWTMMNSNLGRCNVTNGMWPSSVGGIGAGYISNSSQS 200

Query: 155 G---NDHNLNLISKFGFHGFEFANPS---------FSGNGQHLRGLELGLWQDGHNGVLS 298
                + + N + KFGFHG E  N +         F+   Q + GLELGL QDGH GV++
Sbjct: 201 AMNFGNESANALPKFGFHGVELPNINMGLMSFYSMFNATNQQVPGLELGLSQDGHTGVMN 260

Query: 299 SQTINQLYQQVGQDSSSPLNLQQQQRNS----DKDDSQG*R 409
           SQ ++Q YQQ+GQ+ +   +L QQQ++     DKDDSQG R
Sbjct: 261 SQALSQFYQQMGQNRTGLNSLVQQQQHQQQPPDKDDSQGSR 301


>ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|222845113|gb|EEE82660.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  112 bits (281), Expect = 7e-23
 Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 25/161 (15%)
 Frame = +2

Query: 2   SVSATLHSRLDQLG------QSRANWNAVNGNFGRSSV---FWPSLAGFGSGYVPNS--- 145
           SVS  LH++++ LG      + R NW  +N N GRS+V    WPS+ G GSG+VPNS   
Sbjct: 142 SVSTGLHTKMEGLGPAVVGSRDRTNWTMMNTNLGRSNVASGVWPSVGGIGSGFVPNSGQS 201

Query: 146 -SFQGNDHNLNLISKFGFHGFEFANPS---------FSGNGQHLRGLELGLWQDGHNGVL 295
            S  GN+++  L  K+GFHG EF N +         FSG  Q   GLELGL QDGH G+ 
Sbjct: 202 TSNFGNENSTTL-PKYGFHGVEFPNINMGLMSFYSMFSGTNQQFPGLELGLSQDGHGGMF 260

Query: 296 SSQTINQLYQQV--GQDSSSPLNLQQQQRN-SDKDDSQG*R 409
           + Q +N   QQ+  G+   + LN +QQQ    DKDDSQG R
Sbjct: 261 NPQALNPFCQQMVQGRGVLNSLNQEQQQEQPHDKDDSQGSR 301


>ref|XP_002304668.1| predicted protein [Populus trichocarpa] gi|222842100|gb|EEE79647.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 66/161 (40%), Positives = 90/161 (55%), Gaps = 25/161 (15%)
 Frame = +2

Query: 2   SVSATLHSRLDQLG------QSRANWNAVNGNFGRSSV---FWPSLAGFGSGYVPNS--- 145
           SVS  LH++++ LG      + R +W   N   G S+V    WPS+ G G G+VPNS   
Sbjct: 142 SVSTGLHAKMEGLGPGVTGSRDRNDWTLSNTKLGISNVATGVWPSVGGIGLGFVPNSGQS 201

Query: 146 -SFQGNDHNLNLISKFGFHGFEFANPS---------FSGNGQHLRGLELGLWQDGHNGVL 295
            S  GN+ N + + K+GF G EF N +         FSG  Q L GLELGL QDGH+ +L
Sbjct: 202 TSNFGNE-NSSTLPKYGFQGVEFPNINMGLMSFYSMFSGTNQQLPGLELGLSQDGHSAML 260

Query: 296 SSQTINQLYQQV--GQDSSSPLNLQ-QQQRNSDKDDSQG*R 409
           + Q ++  Y Q+  G+     LN + QQ++  DKDDSQG R
Sbjct: 261 NPQALSPFYHQMVQGRGVLDSLNQEKQQEQPPDKDDSQGSR 301


>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 63/162 (38%), Positives = 85/162 (52%), Gaps = 28/162 (17%)
 Frame = +2

Query: 2   SVSATLHSRLDQLG-------QSRANWNAVNGNFGRSSV---FWPSLAGFG--SGYVPNS 145
           S+SA LH ++D+LG        SR +W  V  N GR  V    WP ++GFG  S   P++
Sbjct: 133 SISAGLHQKIDELGGSSIGSGSSRTSWAMVGANLGRPHVATGLWPPVSGFGFQSSSGPST 192

Query: 146 SFQGNDHNLNLISKFGFHGFEFANPSFS---------GNGQHLRGLELGLWQDGHNGVLS 298
           +  GN+ + N + K  F GF+    +           G+ Q L GLELGL QDGH GVL+
Sbjct: 193 TNLGNESS-NYLQKIAFPGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQDGHIGVLN 251

Query: 299 SQTINQLYQQVG-------QDSSSPLNLQQQQRNSDKDDSQG 403
           SQ ++Q+YQQ+G       Q        Q QQ+   KDDSQG
Sbjct: 252 SQALSQIYQQMGQARVHQQQQHQHQHQHQHQQQPPAKDDSQG 293


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 28/162 (17%)
 Frame = +2

Query: 2   SVSATLHSRLDQLG--------QSRANWNAVNGNFGR-----SSVFWPSLAGFG-----S 127
           S+SA LH ++D LG         SR +W  V GN GR     ++  WP + GFG     +
Sbjct: 157 SLSAGLHQKIDDLGGSSSITSSNSRTSWAMVGGNLGRPHHVATTGLWPPVGGFGFQSSST 216

Query: 128 GYVPNSSFQGNDHNLNLISKFGFHGFEFANP-----SFSG-----NGQHLRGLELGLWQD 277
              P +S  GN+ + + + K GF GF+         SF+      + Q + GLELGL QD
Sbjct: 217 TTGPVTSNLGNESS-SYLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQD 275

Query: 278 GHNGVLSSQTINQLYQQVGQDSSSPLNLQQQQRNSDKDDSQG 403
           GH GVL+SQ  +Q+YQQ+GQ      +  Q Q+N  KDDSQG
Sbjct: 276 GHIGVLNSQAFSQIYQQMGQARVQHQHQHQHQQNPAKDDSQG 317


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