BLASTX nr result

ID: Cnidium21_contig00029242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029242
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ...    86   3e-15
ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    81   1e-13
ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    81   1e-13
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    79   3e-13
ref|XP_003538482.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    79   3e-13

>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 592

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/54 (77%), Positives = 48/54 (88%)
 Frame = -1

Query: 320 ATSVNRKKTAQQRRAVQTAEDDDELTRDYRLLKKLKKGAIDENEFAMLTGTEDL 159
           A +V RKKTA+QRRA QT ED+DEL+R+YRLLKKLKKG IDE+EFA LTGTEDL
Sbjct: 538 APTVMRKKTAKQRRAAQTVEDEDELSREYRLLKKLKKGTIDESEFAKLTGTEDL 591


>ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
           sativus] gi|449515784|ref|XP_004164928.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
           sativus]
          Length = 587

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = -1

Query: 320 ATSVNRKKTAQQRRAVQTAEDDDELTRDYRLLKKLKKGAIDENEFAMLTGTEDL 159
           A  + RKKTA+QRRA QTAED+DEL  +YRLLKKLKKG IDE E+A LTGTE+L
Sbjct: 533 AAPILRKKTARQRRATQTAEDEDELAHEYRLLKKLKKGTIDETEYAKLTGTEEL 586


>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
           vinifera]
          Length = 595

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = -1

Query: 320 ATSVNRKKTAQQRRAVQTAEDDDELTRDYRLLKKLKKGAIDENEFAMLTGTEDL 159
           A +V RKKTA+QRR  QT ED+D+L R+YRLLKKLKKG IDE+EFA LTGTE+L
Sbjct: 541 APTVMRKKTAKQRRTAQTIEDEDDLAREYRLLKKLKKGTIDESEFAKLTGTEEL 594


>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
           max]
          Length = 589

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = -1

Query: 323 NATSVNRKKTAQQRRAVQTAEDDDELTRDYRLLKKLKKGAIDENEFAMLTGTEDL 159
           NA +  RKKTA+QRRA QT ED++EL  +YRLLKKLKKG IDENE+A LTGTE+L
Sbjct: 534 NAPTDMRKKTARQRRAQQTMEDEEELMHEYRLLKKLKKGTIDENEYAKLTGTEEL 588


>ref|XP_003538482.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 2
           [Glycine max]
          Length = 493

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = -1

Query: 320 ATSVNRKKTAQQRRAVQTAEDDDELTRDYRLLKKLKKGAIDENEFAMLTGTEDL 159
           A +  RKKTA+QRRA QT ED++EL ++YRLLKKLKKG IDENE+A LTGTE+L
Sbjct: 439 APTATRKKTARQRRAQQTMEDEEELMQEYRLLKKLKKGTIDENEYAKLTGTEEL 492


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