BLASTX nr result

ID: Cnidium21_contig00029239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029239
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...    68   7e-10
emb|CBI27082.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]    68   7e-10
ref|XP_002524388.1| ATP binding protein, putative [Ricinus commu...    67   1e-09
ref|XP_002312374.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
 Frame = -3

Query: 489  VQVTANKSLQIQEISTERDVKHKTV-----KTPDKAVAENAEFSEEVIGTSPDCRYVGGA 325
            V VT  KS++I+E S +R V+ KTV           +AEN E  +E+ G   D       
Sbjct: 1119 VHVTTLKSVEIREYSPDRVVRFKTVDIVGGNNDSARLAENMELRQEIPGNPGDTPGYED- 1177

Query: 324  ERGSTLHEDGDDESEDLNNAEDVDDESEHPGEVSIHKKLWTFFTT 190
            E GS  HE+ D+  ED         ESEHPG+ SI KKLW FFTT
Sbjct: 1178 ENGSMSHEEDDNSDED---------ESEHPGDASIGKKLWNFFTT 1213


>emb|CBI27082.3| unnamed protein product [Vitis vinifera]
          Length = 1122

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
 Frame = -3

Query: 489  VQVTANKSLQIQEISTERDVKHKTV-----KTPDKAVAENAEFSEEVIGTSPDCRYVGGA 325
            V VT  KS++I+E S +R V+ KTV           +AEN E  +E+ G   D       
Sbjct: 1028 VHVTTLKSVEIREYSPDRVVRFKTVDIVGGNNDSARLAENMELRQEIPGNPGDTPGYED- 1086

Query: 324  ERGSTLHEDGDDESEDLNNAEDVDDESEHPGEVSIHKKLWTFFTT 190
            E GS  HE+ D+  ED         ESEHPG+ SI KKLW FFTT
Sbjct: 1087 ENGSMSHEEDDNSDED---------ESEHPGDASIGKKLWNFFTT 1122


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
 Frame = -3

Query: 489  VQVTANKSLQIQEISTERDVKHKTV-----KTPDKAVAENAEFSEEVIGTSPDCRYVGGA 325
            V VT  KS++I+E S +R V+ KTV           +AEN E  +E+ G   D       
Sbjct: 1140 VHVTTLKSVEIREYSPDRVVRFKTVDIVGGNNDSARLAENMELRQEIPGNPGDTPGYED- 1198

Query: 324  ERGSTLHEDGDDESEDLNNAEDVDDESEHPGEVSIHKKLWTFFTT 190
            E GS  HE+ D+  ED         ESEHPG+ SI KKLW FFTT
Sbjct: 1199 ENGSMSHEEDDNSDED---------ESEHPGDASIGKKLWNFFTT 1234


>ref|XP_002524388.1| ATP binding protein, putative [Ricinus communis]
            gi|223536349|gb|EEF37999.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1172

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/85 (50%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
 Frame = -3

Query: 432  VKHKTVKTPDKAVA----ENAEFSEEVIGTSPDCRYVGGAERGSTLHEDGDDESEDLNNA 265
            VK  T    D+A A    E  E SEEV  TS    Y    E GST+HED  ++ +D    
Sbjct: 1098 VKFSTENVNDQADATKSVEITELSEEVNDTS---EYGVEDENGSTIHEDTQEDCDD---- 1150

Query: 264  EDVDDESEHPGEVSIHKKLWTFFTT 190
               DDESEHPGEVSI KK+WTFFTT
Sbjct: 1151 ---DDESEHPGEVSIGKKIWTFFTT 1172


>ref|XP_002312374.1| predicted protein [Populus trichocarpa] gi|222852194|gb|EEE89741.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
 Frame = -3

Query: 489 VQVTANKSLQIQEISTERDVKHKTVKTPDKAVAENA----EFSEEVIGTSPDCRYVGGAE 322
           VQVT  KS+   E+S ++ V+ +T     +A A  +    E SEEV G  PD  +   AE
Sbjct: 40  VQVTTLKSV---ELSQDKVVRFQTTDVDYQAEAAKSVGITELSEEVNGI-PD--FEDEAE 93

Query: 321 RGSTLHEDGDDESEDLNNAEDVDDESEHPGEVSIHKKLWTFFTT 190
            GST+HED DD  ED         E +HPGEVS+ KK+WTFFTT
Sbjct: 94  NGSTVHEDEDDYDED---------ELQHPGEVSMGKKIWTFFTT 128


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