BLASTX nr result

ID: Cnidium21_contig00029237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029237
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD10836.1| P-glycoprotein [Solanum tuberosum]                     105   5e-21
tpg|DAA48547.1| TPA: hypothetical protein ZEAMMB73_189648 [Zea m...    99   5e-19
tpg|DAA48546.1| TPA: PGP1 [Zea mays]                                   99   5e-19
ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1...    99   5e-19
gb|AAR00316.1| PGP1 [Zea mays]                                         99   5e-19

>gb|AAD10836.1| P-glycoprotein [Solanum tuberosum]
          Length = 1313

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/86 (66%), Positives = 62/86 (72%), Gaps = 13/86 (15%)
 Frame = -1

Query: 219 SDRLDCVLMIIGTVGDFVHD-SLPVFLSFFANLVNSV------------VCL*YAF*FLV 79
           +D LDCVLMIIG++G FVH  SLP+FL FFA+LVNS               L YAF FLV
Sbjct: 62  ADGLDCVLMIIGSLGAFVHGCSLPLFLRFFADLVNSFGSYANDVDKMTQEVLKYAFYFLV 121

Query: 78  VGLAIWASSWAEISCWMWIGERQTTK 1
           VG AIWASSWAEISCWMW GERQTTK
Sbjct: 122 VGAAIWASSWAEISCWMWTGERQTTK 147


>tpg|DAA48547.1| TPA: hypothetical protein ZEAMMB73_189648 [Zea mays]
          Length = 598

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 13/86 (15%)
 Frame = -1

Query: 219 SDRLDCVLMIIGTVGDFVHD-SLPVFLSFFANLVNSV------------VCL*YAF*FLV 79
           +D LDC LM+IGT+G  VH  SLPVFL FFA+LV+S             + + YAF FLV
Sbjct: 131 ADGLDCALMLIGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRLVVKYAFYFLV 190

Query: 78  VGLAIWASSWAEISCWMWIGERQTTK 1
           VG AIWASSWAEISCWMW GERQ+T+
Sbjct: 191 VGAAIWASSWAEISCWMWTGERQSTR 216


>tpg|DAA48546.1| TPA: PGP1 [Zea mays]
          Length = 1379

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 13/86 (15%)
 Frame = -1

Query: 219 SDRLDCVLMIIGTVGDFVHD-SLPVFLSFFANLVNSV------------VCL*YAF*FLV 79
           +D LDC LM+IGT+G  VH  SLPVFL FFA+LV+S             + + YAF FLV
Sbjct: 131 ADGLDCALMLIGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRLVVKYAFYFLV 190

Query: 78  VGLAIWASSWAEISCWMWIGERQTTK 1
           VG AIWASSWAEISCWMW GERQ+T+
Sbjct: 191 VGAAIWASSWAEISCWMWTGERQSTR 216


>ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1343

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/86 (62%), Positives = 60/86 (69%), Gaps = 13/86 (15%)
 Frame = -1

Query: 219 SDRLDCVLMIIGTVGDFVHD-SLPVFLSFFANLVNSV------------VCL*YAF*FLV 79
           SD LD +LM IGTVG FVH  SLP+FL FFA+LVNS               + YAF FLV
Sbjct: 90  SDGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANDLDKMTQEVVKYAFYFLV 149

Query: 78  VGLAIWASSWAEISCWMWIGERQTTK 1
           VG AIWASSWAEISCWMW GERQ+T+
Sbjct: 150 VGAAIWASSWAEISCWMWTGERQSTR 175


>gb|AAR00316.1| PGP1 [Zea mays]
          Length = 1394

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 13/86 (15%)
 Frame = -1

Query: 219 SDRLDCVLMIIGTVGDFVHD-SLPVFLSFFANLVNSV------------VCL*YAF*FLV 79
           +D LDC LM+IGT+G  VH  SLPVFL FFA+LV+S             + + YAF FLV
Sbjct: 131 ADGLDCALMLIGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRLVVKYAFYFLV 190

Query: 78  VGLAIWASSWAEISCWMWIGERQTTK 1
           VG AIWASSWAEISCWMW GERQ+T+
Sbjct: 191 VGAAIWASSWAEISCWMWTGERQSTR 216


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