BLASTX nr result

ID: Cnidium21_contig00029236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029236
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625677.1| ABC transporter-like protein, partial [Medic...   174   8e-42
ref|XP_003541417.1| PREDICTED: ABC transporter B family member 1...   170   1e-40
ref|XP_002519488.1| multidrug resistance protein 1, 2, putative ...   170   2e-40
ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1...   169   3e-40
ref|XP_004173771.1| PREDICTED: ABC transporter B family member 1...   167   1e-39

>ref|XP_003625677.1| ABC transporter-like protein, partial [Medicago truncatula]
           gi|355500692|gb|AES81895.1| ABC transporter-like
           protein, partial [Medicago truncatula]
          Length = 658

 Score =  174 bits (441), Expect = 8e-42
 Identities = 97/177 (54%), Positives = 117/177 (66%), Gaps = 5/177 (2%)
 Frame = -1

Query: 517 VSSSEQWKCSETEGIQLVV-----STPHPTQIHLQAQTFSKPQATSLDKTQKEESKFKTQ 353
           + ++EQWK SE +G++LV      S+  P + +L   T     AT  D   + + +   +
Sbjct: 8   IKTTEQWKWSEMQGLELVSDDNNSSSSDPFKGNLPTVTEEGVTATVSDS--QNQVQVSKE 65

Query: 352 MEGTSDQGSSKKTDEDKKKQPAAVGFLELFRFADRLDYVLMIIGTVGAFVHGCSLPVFLR 173
           ME     G SK    +K K   AVGF ELFRFAD LDY+LM IGTVGA VHGCSLP+FLR
Sbjct: 66  MEEHKKDGGSK----EKVKSAPAVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPLFLR 121

Query: 172 FFADLVNSFGSNADNIDKMTQEVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTT 2
           FFADLVNSFGSNA+N+DKMTQEV+KYAFYFLVVG           SCWMWTGERQ+T
Sbjct: 122 FFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQST 178


>ref|XP_003541417.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1341

 Score =  170 bits (431), Expect = 1e-40
 Identities = 92/172 (53%), Positives = 116/172 (67%)
 Frame = -1

Query: 517 VSSSEQWKCSETEGIQLVVSTPHPTQIHLQAQTFSKPQATSLDKTQKEESKFKTQMEGTS 338
           + + EQW+ SE +G++L+ S+   +  H    T  + +   +++    E K +    GT 
Sbjct: 8   IKTVEQWRWSEMQGLELMSSSAPVSNSHESNPTLEEERV--MEEASSVEKK-EGVPNGTR 64

Query: 337 DQGSSKKTDEDKKKQPAAVGFLELFRFADRLDYVLMIIGTVGAFVHGCSLPVFLRFFADL 158
           D G  KK    K +  A+V F ELFRFAD LDY+LM IGTVGAFVHGCSLP+FLRFFADL
Sbjct: 65  DGGGEKK----KGETVASVWFGELFRFADGLDYILMAIGTVGAFVHGCSLPLFLRFFADL 120

Query: 157 VNSFGSNADNIDKMTQEVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTT 2
           VNSFGSNA+++DKMTQEV+KYAFYFLVVG           SCWMWTGERQ+T
Sbjct: 121 VNSFGSNANDLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQST 172


>ref|XP_002519488.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223541351|gb|EEF42902.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1352

 Score =  170 bits (430), Expect = 2e-40
 Identities = 90/175 (51%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
 Frame = -1

Query: 517 VSSSEQWKCSETEGIQLVVSTPHPTQIHLQAQTFSKPQATSLDKTQKEESKFKTQMEGTS 338
           + + EQWK SE +G++LV S P         +T S   +      Q++E   +  +  T 
Sbjct: 8   IKTIEQWKWSEMQGLELVSSAPSNPSSSDPFKTNSTSNSHYSISQQQQEQNHQDTVPETK 67

Query: 337 DQGSSKKTDE---DKKKQPAAVGFLELFRFADRLDYVLMIIGTVGAFVHGCSLPVFLRFF 167
           D  ++KK      +K+   A VGF ELFRFAD LDYVLM IG++GA VHG SLP+FLRFF
Sbjct: 68  DMDNNKKDSNGSGEKQGDVATVGFCELFRFADSLDYVLMAIGSIGALVHGSSLPLFLRFF 127

Query: 166 ADLVNSFGSNADNIDKMTQEVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTT 2
           ADLVNSFGSNA+++DKM QEVLKYAFYFL+VG           SCWMWTGERQ+T
Sbjct: 128 ADLVNSFGSNANDMDKMMQEVLKYAFYFLIVGAAIWASSWAEISCWMWTGERQST 182


>ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1343

 Score =  169 bits (428), Expect = 3e-40
 Identities = 93/173 (53%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
 Frame = -1

Query: 517 VSSSEQWKCSETEGIQLVVSTPHPTQIHLQAQTFSKPQATSLDKTQKEESKFKTQMEGTS 338
           + + EQW+ SE +GI+LV S+   +  H       K +   +    +E S    + EG  
Sbjct: 8   IKTLEQWRWSEMQGIELVSSSATVSNSHESNPALEKKREERV--IMEEVSSVAKKEEGVP 65

Query: 337 DQ-GSSKKTDEDKKKQPAAVGFLELFRFADRLDYVLMIIGTVGAFVHGCSLPVFLRFFAD 161
           +  G  KK D       A+VGF ELFRF+D LDY+LM IGTVGAFVHGCSLP+FLRFFAD
Sbjct: 66  NGVGGEKKKDGSV----ASVGFGELFRFSDGLDYILMAIGTVGAFVHGCSLPLFLRFFAD 121

Query: 160 LVNSFGSNADNIDKMTQEVLKYAFYFLVVGXXXXXXXXXXXSCWMWTGERQTT 2
           LVNSFGSNA+++DKMTQEV+KYAFYFLVVG           SCWMWTGERQ+T
Sbjct: 122 LVNSFGSNANDLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQST 174


>ref|XP_004173771.1| PREDICTED: ABC transporter B family member 1-like [Cucumis sativus]
          Length = 384

 Score =  167 bits (422), Expect = 1e-39
 Identities = 94/185 (50%), Positives = 117/185 (63%), Gaps = 13/185 (7%)
 Frame = -1

Query: 517 VSSSEQWKCSETEGIQLVVS--TPHPTQIHLQAQTFSKPQATSLDKTQKEE-----SKFK 359
           + ++EQWK SE +G++L+ S   P P        T        L  TQ+ +     +K++
Sbjct: 8   IKTTEQWKWSEMQGLELLSSHPLPPPDPFITNNPTPENTDPEHLRPTQEPQDGVGRAKYR 67

Query: 358 TQMEGTSDQ------GSSKKTDEDKKKQPAAVGFLELFRFADRLDYVLMIIGTVGAFVHG 197
            +ME T+D       G    T  +K +   A+GF ELFRFAD LDYVLM IG+VGA VHG
Sbjct: 68  -EMESTTDSKKENGGGGGGSTSGEKPEAVTAIGFGELFRFADGLDYVLMAIGSVGALVHG 126

Query: 196 CSLPVFLRFFADLVNSFGSNADNIDKMTQEVLKYAFYFLVVGXXXXXXXXXXXSCWMWTG 17
           CSLP+FLRFFADLVNSFGS A+++DKM QEVLKYAFYFLVVG           SCWMWTG
Sbjct: 127 CSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTG 186

Query: 16  ERQTT 2
           ERQ+T
Sbjct: 187 ERQST 191


Top