BLASTX nr result

ID: Cnidium21_contig00029220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029220
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254...   247   2e-63
emb|CBI24192.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_002513370.1| conserved hypothetical protein [Ricinus comm...   245   8e-63
ref|XP_002887773.1| mitochondrial transcription termination fact...   226   3e-57
ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|2...   223   4e-56

>ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254688 [Vitis vinifera]
          Length = 492

 Score =  247 bits (631), Expect = 2e-63
 Identities = 121/211 (57%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
 Frame = -2

Query: 633 STTLINKN-DGGIEQVQVGGNHHPNDSTEVLMKWGCTQNDVSMIFKRLPSLRNSNPVGLN 457
           +T LIN   DG + +V+   + HP +ST+V  KWGC+ ++++ IF R PSLR ++P  + 
Sbjct: 151 TTALINGTPDGNLVEVR---DDHPINSTDVFRKWGCSDSEIAKIFVRRPSLRRADPNLIQ 207

Query: 456 SKLSILGQVGLDSSDLIRIVNCRPRFLSCCIHQLFEERLGYLVELFGSREILRKAIVRNP 277
           SKL++L  +GL S+DL++I+NCRPRFLSC I++ F+ER+ + +ELFGSR+ LRKAIVRNP
Sbjct: 208 SKLNVLSLLGLTSADLVKIINCRPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNP 267

Query: 276 SLLVYDLHTKTKPAIQLYEKLGVGKKALVPMLISYPTLIPRTVFNDEKMSYIRKTGVSKD 97
           SLL+YDL++K K  ++LYE +GV +K  + M+ S PT+I RT FNDEK+ YIR+TGVSK 
Sbjct: 268 SLLIYDLNSKIKRVVELYEGMGVARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKK 327

Query: 96  SKMYKYVVCIIGISRVETIREKVANFEKFGF 4
           SKMYKYVV ++GISR+ETIREKV N EKFGF
Sbjct: 328 SKMYKYVVVLMGISRLETIREKVGNLEKFGF 358


>emb|CBI24192.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  247 bits (631), Expect = 2e-63
 Identities = 121/211 (57%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
 Frame = -2

Query: 633 STTLINKN-DGGIEQVQVGGNHHPNDSTEVLMKWGCTQNDVSMIFKRLPSLRNSNPVGLN 457
           +T LIN   DG + +V+   + HP +ST+V  KWGC+ ++++ IF R PSLR ++P  + 
Sbjct: 69  TTALINGTPDGNLVEVR---DDHPINSTDVFRKWGCSDSEIAKIFVRRPSLRRADPNLIQ 125

Query: 456 SKLSILGQVGLDSSDLIRIVNCRPRFLSCCIHQLFEERLGYLVELFGSREILRKAIVRNP 277
           SKL++L  +GL S+DL++I+NCRPRFLSC I++ F+ER+ + +ELFGSR+ LRKAIVRNP
Sbjct: 126 SKLNVLSLLGLTSADLVKIINCRPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNP 185

Query: 276 SLLVYDLHTKTKPAIQLYEKLGVGKKALVPMLISYPTLIPRTVFNDEKMSYIRKTGVSKD 97
           SLL+YDL++K K  ++LYE +GV +K  + M+ S PT+I RT FNDEK+ YIR+TGVSK 
Sbjct: 186 SLLIYDLNSKIKRVVELYEGMGVARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKK 245

Query: 96  SKMYKYVVCIIGISRVETIREKVANFEKFGF 4
           SKMYKYVV ++GISR+ETIREKV N EKFGF
Sbjct: 246 SKMYKYVVVLMGISRLETIREKVGNLEKFGF 276


>ref|XP_002513370.1| conserved hypothetical protein [Ricinus communis]
           gi|223547278|gb|EEF48773.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 384

 Score =  245 bits (625), Expect = 8e-63
 Identities = 122/205 (59%), Positives = 152/205 (74%)
 Frame = -2

Query: 618 NKNDGGIEQVQVGGNHHPNDSTEVLMKWGCTQNDVSMIFKRLPSLRNSNPVGLNSKLSIL 439
           N  +GG+EQ        P DS  VL KWGC+  D+  I  R PSLRN++   L SKL++L
Sbjct: 54  NDTEGGLEQ--------PKDSIGVLRKWGCSDRDLLKILSRRPSLRNADLTHLQSKLNLL 105

Query: 438 GQVGLDSSDLIRIVNCRPRFLSCCIHQLFEERLGYLVELFGSREILRKAIVRNPSLLVYD 259
             +G+  +DL++I+NCRPRFLS  I+  F+ERL Y + LFGS+E+L KAIVRNPSLL YD
Sbjct: 106 QGLGIKPADLVKIINCRPRFLSSRINHCFDERLQYFMTLFGSKEVLLKAIVRNPSLLTYD 165

Query: 258 LHTKTKPAIQLYEKLGVGKKALVPMLISYPTLIPRTVFNDEKMSYIRKTGVSKDSKMYKY 79
            H   KPAI LYE++GV K  L+PML+S PT+IPRT F+D+K+ YIR+TGV   SKMYKY
Sbjct: 166 FHNCIKPAIALYERMGVSKNDLIPMLLSRPTVIPRTSFDDQKIEYIRRTGVPNTSKMYKY 225

Query: 78  VVCIIGISRVETIREKVANFEKFGF 4
           VV IIGIS++ETIREKVANFEKFGF
Sbjct: 226 VVTIIGISKIETIREKVANFEKFGF 250


>ref|XP_002887773.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297333614|gb|EFH64032.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 405

 Score =  226 bits (577), Expect = 3e-57
 Identities = 105/188 (55%), Positives = 143/188 (76%)
 Frame = -2

Query: 567 PNDSTEVLMKWGCTQNDVSMIFKRLPSLRNSNPVGLNSKLSILGQVGLDSSDLIRIVNCR 388
           P+   +VL +WGC  +++S +F R P+L+ +N   L  KLS+L  +G+ SSDL++I+NCR
Sbjct: 84  PSSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLVKILNCR 143

Query: 387 PRFLSCCIHQLFEERLGYLVELFGSREILRKAIVRNPSLLVYDLHTKTKPAIQLYEKLGV 208
           PRF SC IH + +ER+ Y +E+ GS+E+LR+ I+RNPSL++YDL  K KPAI+ Y+ LG 
Sbjct: 144 PRFFSCRIHLVLDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEFYKGLGC 203

Query: 207 GKKALVPMLISYPTLIPRTVFNDEKMSYIRKTGVSKDSKMYKYVVCIIGISRVETIREKV 28
            ++ LV MLIS PTLIPRT FN EK  YI+KTGV+++SKM+KYV  IIG+SR+ETI EKV
Sbjct: 204 SQQDLVTMLISRPTLIPRTNFNKEKFEYIQKTGVTRESKMFKYVAAIIGVSRMETIEEKV 263

Query: 27  ANFEKFGF 4
            N EKFGF
Sbjct: 264 RNLEKFGF 271


>ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|222853574|gb|EEE91121.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  223 bits (567), Expect = 4e-56
 Identities = 108/182 (59%), Positives = 140/182 (76%)
 Frame = -2

Query: 552 EVLMKWGCTQNDVSMIFKRLPSLRNSNPVGLNSKLSILGQVGLDSSDLIRIVNCRPRFLS 373
           EVL ++GC+ +D+  +F R PSLRN++   L  KL++L  +G+ S+DL++I+NCRPR LS
Sbjct: 2   EVLRRYGCSDDDIEKMFLRRPSLRNADLSQLQFKLNLLWGLGITSNDLVKIINCRPRLLS 61

Query: 372 CCIHQLFEERLGYLVELFGSREILRKAIVRNPSLLVYDLHTKTKPAIQLYEKLGVGKKAL 193
             I+  F+ERL Y + LFGSRE L KAI+RNPSLL YD H + KP I LYE LG+ ++ L
Sbjct: 62  VRINHFFDERLEYFMTLFGSRETLLKAIIRNPSLLTYDFHNRIKPVITLYEGLGISREDL 121

Query: 192 VPMLISYPTLIPRTVFNDEKMSYIRKTGVSKDSKMYKYVVCIIGISRVETIREKVANFEK 13
           VP+L+S PT+IPRT FNDEKM YIRK+GVSKDS M+K+VV IIG+SR +TI EK AN EK
Sbjct: 122 VPLLLSRPTMIPRTSFNDEKMEYIRKSGVSKDSNMFKHVVSIIGVSRSQTICEKAANIEK 181

Query: 12  FG 7
           FG
Sbjct: 182 FG 183


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