BLASTX nr result

ID: Cnidium21_contig00029201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029201
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308745.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47
emb|CBI41066.3| unnamed protein product [Vitis vinifera]              192   4e-47
ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   186   3e-45
ref|XP_004156734.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   176   2e-42
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   176   2e-42

>ref|XP_002308745.1| predicted protein [Populus trichocarpa] gi|222854721|gb|EEE92268.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  193 bits (491), Expect = 2e-47
 Identities = 101/157 (64%), Positives = 115/157 (73%)
 Frame = +3

Query: 3   FDDNIPSRAFDNFQFVNFTEIMSKNVPIFQKETEFALAALMEIPSQYKATLDFQLLSNQR 182
           FDDNIPSRAFDNFQFVNFTEIMSKN+P+ +KETEFAL ALMEIPSQYKAT+D QLL  Q+
Sbjct: 255 FDDNIPSRAFDNFQFVNFTEIMSKNIPMSKKETEFALDALMEIPSQYKATIDLQLLGCQK 314

Query: 183 TTTRRNALPPPIQNRSTTHSNRNYMQSNNVMQSDRMYYTPQPPSTQNILPNRGCPICSYN 362
               RNALPPP+ N S  +S   Y +S    +S+  Y     PST +   NR CP C +N
Sbjct: 315 GAPGRNALPPPLGNGS-VNSYPTYSRS----RSNAAYV----PSTDHSSDNRHCPSCLWN 365

Query: 363 MKDLAFGCGHQTCYECGKDLFICPECHLPITTKIRLY 473
            KDLAFGCGHQTCY+CGKDL  CP C   ITTKI+LY
Sbjct: 366 KKDLAFGCGHQTCYDCGKDLNQCPICQAYITTKIKLY 402


>emb|CBI41066.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  192 bits (488), Expect = 4e-47
 Identities = 93/157 (59%), Positives = 108/157 (68%)
 Frame = +3

Query: 3   FDDNIPSRAFDNFQFVNFTEIMSKNVPIFQKETEFALAALMEIPSQYKATLDFQLLSNQR 182
           FDDNIPSRAFDNFQFVNFT+I  +N  I +KE +FALAALMEIPSQYKATLD  LL  +R
Sbjct: 258 FDDNIPSRAFDNFQFVNFTDITRRNTSISKKEADFALAALMEIPSQYKATLDLHLLGCRR 317

Query: 183 TTTRRNALPPPIQNRSTTHSNRNYMQSNNVMQSDRMYYTPQPPSTQNILPNRGCPICSYN 362
            T  R  LPPP++     +S   Y  S+N  QS    + P P  T N   NR CP+C ++
Sbjct: 318 GTPGRTPLPPPVKIHPIVNSYTPYQGSSNFEQSIAYRFAPSPAPTDNSSHNRNCPVCFFS 377

Query: 363 MKDLAFGCGHQTCYECGKDLFICPECHLPITTKIRLY 473
            KDLAFGCGHQ CYECGK+L  CP C   ITT+IRLY
Sbjct: 378 TKDLAFGCGHQACYECGKELVNCPICRTHITTRIRLY 414


>ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 420

 Score =  186 bits (472), Expect = 3e-45
 Identities = 93/162 (57%), Positives = 108/162 (66%), Gaps = 5/162 (3%)
 Frame = +3

Query: 3   FDDNIPSRAFDNFQFVNFTEIMSKNVPIFQKETEFALAALMEIPSQYKATLDFQLLSNQR 182
           FDDNIPSRAFDNFQFVNFT+I  +N  I +KE +FALAALMEIPSQYKATLD  LL  +R
Sbjct: 258 FDDNIPSRAFDNFQFVNFTDITRRNTSISKKEADFALAALMEIPSQYKATLDLHLLGCRR 317

Query: 183 TTTRRNALPPPIQNRSTTHSNRNYMQSNNVMQSDRMYYTPQPPSTQNILPNR-----GCP 347
            T  R  LPPP++     +S   Y  S+N  QS    + P P  T N   NR      CP
Sbjct: 318 GTPGRTPLPPPVKIHPIVNSYTPYQGSSNFEQSIAYRFAPSPAPTDNSSHNRFNDLQNCP 377

Query: 348 ICSYNMKDLAFGCGHQTCYECGKDLFICPECHLPITTKIRLY 473
           +C ++ KDLAFGCGHQ CYECGK+L  CP C   ITT+IRLY
Sbjct: 378 VCFFSTKDLAFGCGHQACYECGKELVNCPICRTHITTRIRLY 419


>ref|XP_004156734.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like, partial [Cucumis
           sativus]
          Length = 288

 Score =  176 bits (447), Expect = 2e-42
 Identities = 89/171 (52%), Positives = 112/171 (65%), Gaps = 14/171 (8%)
 Frame = +3

Query: 3   FDDNIPSRAFDNFQFVNFTEIMSKNVPIFQKETEFALAALMEIPSQYKATLDFQLLSNQR 182
           FDDNIPSRAFDNFQFVNFTEIMSKN+P  +KETEFALAALMEIPSQYKAT++  +L  ++
Sbjct: 118 FDDNIPSRAFDNFQFVNFTEIMSKNIPTSRKETEFALAALMEIPSQYKATIELDILGGRK 177

Query: 183 -TTTRRNALPPPIQNRSTTHSNRNYMQSNNVMQSDRMYYTPQ-------------PPSTQ 320
             + +R ALPPP+   ++ +S++++  S     S      P              PP   
Sbjct: 178 GVSPQRVALPPPVYGAASLNSSKSFSNSKPTWSSSYEPSVPSFSVNRNPTPTSTAPPVAS 237

Query: 321 NILPNRGCPICSYNMKDLAFGCGHQTCYECGKDLFICPECHLPITTKIRLY 473
           +   N+ CPIC  N KD+AFGCGHQTC ECG+DL  CP C   I T+I+LY
Sbjct: 238 STYDNQVCPICLTNPKDMAFGCGHQTCCECGQDLQTCPICRSTIHTRIKLY 288


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  176 bits (447), Expect = 2e-42
 Identities = 89/171 (52%), Positives = 112/171 (65%), Gaps = 14/171 (8%)
 Frame = +3

Query: 3   FDDNIPSRAFDNFQFVNFTEIMSKNVPIFQKETEFALAALMEIPSQYKATLDFQLLSNQR 182
           FDDNIPSRAFDNFQFVNFTEIMSKN+P  +KETEFALAALMEIPSQYKAT++  +L  ++
Sbjct: 277 FDDNIPSRAFDNFQFVNFTEIMSKNIPTSRKETEFALAALMEIPSQYKATIELDILGGRK 336

Query: 183 -TTTRRNALPPPIQNRSTTHSNRNYMQSNNVMQSDRMYYTPQ-------------PPSTQ 320
             + +R ALPPP+   ++ +S++++  S     S      P              PP   
Sbjct: 337 GVSPQRVALPPPVYGAASLNSSKSFSNSKPTWSSSYEPSVPSFSVNRNPTPTSTAPPVAS 396

Query: 321 NILPNRGCPICSYNMKDLAFGCGHQTCYECGKDLFICPECHLPITTKIRLY 473
           +   N+ CPIC  N KD+AFGCGHQTC ECG+DL  CP C   I T+I+LY
Sbjct: 397 STYDNQVCPICLTNPKDMAFGCGHQTCCECGQDLQTCPICRSTIHTRIKLY 447


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