BLASTX nr result

ID: Cnidium21_contig00029183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029183
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266735.2| PREDICTED: trihelix transcription factor GT-...   295   1e-77
ref|XP_003612572.1| Zinc finger and SCAN domain-containing prote...   274   2e-71
gb|ABR92761.1| transcription factor TF2 [Gossypium hirsutum]          260   5e-67
emb|CAH67865.1| B0403H10-OSIGBa0105A11.17 [Oryza sativa Indica G...   244   4e-62
ref|XP_002448463.1| hypothetical protein SORBIDRAFT_06g027540 [S...   242   1e-61

>ref|XP_002266735.2| PREDICTED: trihelix transcription factor GT-3b-like [Vitis
           vinifera]
          Length = 303

 Score =  295 bits (755), Expect = 1e-77
 Identities = 158/279 (56%), Positives = 191/279 (68%), Gaps = 8/279 (2%)
 Frame = -2

Query: 962 RDERVLQWGQQETRDFIGIRADLERDFNVSKRNKSLWEVVSCKMKERGFVRTPDQCKYKW 783
           ++ERV QW  QET+DFI IRA+LERDF ++KRNK+LWE V+ KMKE G+ RTPDQCK KW
Sbjct: 43  KEERVPQWSHQETKDFIAIRAELERDFALTKRNKTLWEAVASKMKEMGYKRTPDQCKCKW 102

Query: 782 KNLVMRYKAKETSDME---KCPFFEELHAVFAERADNMQRFHLEPGAGP--AKKRVKRNS 618
           KNLV RYK KETSD E   +CPFFEELHA+F ERA NMQR  LE  AG   ++KR +R S
Sbjct: 103 KNLVNRYKGKETSDPENGRQCPFFEELHAIFEERAKNMQRRLLESEAGSMQSRKRARRIS 162

Query: 617 ---WXXXXXXXXXXXXXXXXXXXEAGRNSNPRKRRGGREKQLSRSTLEKQSPRQPXXXXX 447
                                     R+SNPRKR+  RE+ L  +  +  S         
Sbjct: 163 AGDHSSDEFSEDEDDDEDDSEEERLPRSSNPRKRKAERERPLRATASDVNS--------- 213

Query: 446 XXXXXXXXXSIQDMLREFIQQQQRIDMEWRESMEKRAYERLLFEQEWRQSMEKLERERIM 267
                     I +ML+EF QQQQR++M+WRE+ME+RA ER +FEQEWRQSMEKLERER+M
Sbjct: 214 ----------IPEMLKEFFQQQQRMEMQWREAMERRAQERQMFEQEWRQSMEKLERERLM 263

Query: 266 IEQTWREKEEQRRMRDESRAEKRDALLTSLLNKLIHEDH 150
           +EQ WRE+EEQRR R+ESRAEKRD LLT+LLNKLIHE+H
Sbjct: 264 VEQAWREREEQRRAREESRAEKRDVLLTTLLNKLIHENH 302


>ref|XP_003612572.1| Zinc finger and SCAN domain-containing protein [Medicago truncatula]
            gi|355513907|gb|AES95530.1| Zinc finger and SCAN
            domain-containing protein [Medicago truncatula]
          Length = 302

 Score =  274 bits (701), Expect = 2e-71
 Identities = 166/333 (49%), Positives = 204/333 (61%), Gaps = 16/333 (4%)
 Frame = -2

Query: 1100 MYGGRGREHNQTLGGRLN----QIMMPVQLHSNPTXXXXXXXXXXXDFPRRDERVL---Q 942
            MYGG G +    L  RL      +++P     +P                R+ERV    Q
Sbjct: 1    MYGGGGGD--DALAARLGIVPQSLLIPTSSLMSPAAM-------------REERVPAQPQ 45

Query: 941  WGQQETRDFIGIRADLERDFNVSKRNKSLWEVVSCKMKERGFVRTPDQCKYKWKNLVMRY 762
            W QQETR+FI IRA+LERDF  SKRNK+LWEVVS KM+ERG+ R+P+QCK KWKNLV RY
Sbjct: 46   WSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRY 105

Query: 761  KAKETSDME---KCPFFEELHAVFAERADNMQRFHLEPGAGPA--KKRVKRNSWXXXXXX 597
            K KETSD E   +CPFFEELHAVF ERA +MQR  LE     A  KK VK+         
Sbjct: 106  KGKETSDPEHGKQCPFFEELHAVFTERAHSMQRLLLESETRSAQTKKGVKKIRSGDRSSD 165

Query: 596  XXXXXXXXXXXXXEAGR--NSNPRKRRGGR--EKQLSRSTLEKQSPRQPXXXXXXXXXXX 429
                         E  R   SN RKR+ G+   ++ SR+     S               
Sbjct: 166  EFSEDDEEVEDDSEEERPVRSNTRKRKAGKIATEKSSRANNANNSTGN------------ 213

Query: 428  XXXSIQDMLREFIQQQQRIDMEWRESMEKRAYERLLFEQEWRQSMEKLERERIMIEQTWR 249
                IQ+ML+EF Q Q +++M+WRE ME+RA+E+ LFEQEWRQSMEKLERER+MIEQ WR
Sbjct: 214  ----IQEMLKEFFQHQLKVEMQWREVMERRAHEKQLFEQEWRQSMEKLERERLMIEQEWR 269

Query: 248  EKEEQRRMRDESRAEKRDALLTSLLNKLIHEDH 150
            E+EE RR+R+E+RAE+RDALLT+LLNKLIHE +
Sbjct: 270  EREEHRRLREENRAERRDALLTTLLNKLIHESN 302


>gb|ABR92761.1| transcription factor TF2 [Gossypium hirsutum]
          Length = 261

 Score =  260 bits (664), Expect = 5e-67
 Identities = 141/272 (51%), Positives = 180/272 (66%), Gaps = 7/272 (2%)
 Frame = -2

Query: 944 QWGQQETRDFIGIRADLERDFNVSKRNKSLWEVVSCKMKERGFVRTPDQCKYKWKNLVMR 765
           QWGQ+ETR+ I IR +LERDF  +K NK+LWE+VS +MK+RG+ RTPDQCK KWKNL+ R
Sbjct: 6   QWGQEETRELIFIRGELERDFTAAKHNKTLWEIVSARMKDRGYTRTPDQCKSKWKNLLNR 65

Query: 764 YKAKETSDME---KCPFFEELHAVFAERADNMQRFHLEPGAGP----AKKRVKRNSWXXX 606
           YK KETSD E   + PFFEELHAVF ERA  MQR  LEP AG     AKK+VKR +    
Sbjct: 66  YKGKETSDPENGCQFPFFEELHAVFTERAKTMQRRLLEPEAGSGSTQAKKKVKRTTTERS 125

Query: 605 XXXXXXXXXXXXXXXXEAGRNSNPRKRRGGREKQLSRSTLEKQSPRQPXXXXXXXXXXXX 426
                           +  R  + ++++       S ST+  +SPR              
Sbjct: 126 SDEFSEGEDEDESEEEKPARGISHKRKK-------SDSTVLDKSPRPNSGTSTGP----- 173

Query: 425 XXSIQDMLREFIQQQQRIDMEWRESMEKRAYERLLFEQEWRQSMEKLERERIMIEQTWRE 246
               Q+MLREF  QQ R++M+WRE MEKRA ER LFEQEW+  MEKLERER+M+E+ WRE
Sbjct: 174 ----QEMLREFFDQQLRMEMQWREMMEKRAQERQLFEQEWQHWMEKLERERLMVEKAWRE 229

Query: 245 KEEQRRMRDESRAEKRDALLTSLLNKLIHEDH 150
           +EE+ R R+ESRAE+RD+LLT+LLNKLI++++
Sbjct: 230 REEEMRRREESRAERRDSLLTTLLNKLINDNN 261


>emb|CAH67865.1| B0403H10-OSIGBa0105A11.17 [Oryza sativa Indica Group]
           gi|125549605|gb|EAY95427.1| hypothetical protein
           OsI_17269 [Oryza sativa Indica Group]
          Length = 277

 Score =  244 bits (622), Expect = 4e-62
 Identities = 133/280 (47%), Positives = 184/280 (65%), Gaps = 10/280 (3%)
 Frame = -2

Query: 962 RDERVLQWGQQETRDFIGIRADLERDFNVS----KRNKSLWEVVSCKMKERGFVRTPDQC 795
           RDERV QWG QETR+ I  R ++ER+   +    +  K+LWE VS +++ERG+ RT +QC
Sbjct: 15  RDERVPQWGAQETRELIAARGEMERESAAAAAARRSAKTLWEAVSARLRERGYRRTAEQC 74

Query: 794 KYKWKNLVMRYKAKETSDME---KCPFFEELHAVFAERADNMQRFHLEPGAGPA-KKRVK 627
           K KWKNLV RYK KETSD E   +CPFF+ELHAVF ERA  MQ+  LE  +GP+ KK++K
Sbjct: 75  KCKWKNLVNRYKGKETSDPENGRQCPFFDELHAVFTERARTMQQQLLESESGPSVKKKLK 134

Query: 626 RNSWXXXXXXXXXXXXXXXXXXXEAGRNSNPRKRRGG--REKQLSRSTLEKQSPRQPXXX 453
           R S                     +  +S+  +  GG   +++  RS   K + ++    
Sbjct: 135 RPS------------------GDLSSEDSDDEEDGGGDSGDEKPIRSRKRKIADKRQQSQ 176

Query: 452 XXXXXXXXXXXSIQDMLREFIQQQQRIDMEWRESMEKRAYERLLFEQEWRQSMEKLERER 273
                      S  ++L++F+ QQQR+D++W E ME+R+ ER++FEQEWRQSM+KLE+ER
Sbjct: 177 RMAEKSRTSISSTHELLQDFLVQQQRMDIQWHEMMERRSQERIVFEQEWRQSMQKLEQER 236

Query: 272 IMIEQTWREKEEQRRMRDESRAEKRDALLTSLLNKLIHED 153
           +M+E TW E+EEQRRMR+E+RAEKRDALLT+LLNK++ ED
Sbjct: 237 LMLEHTWMEREEQRRMREEARAEKRDALLTTLLNKVLQED 276


>ref|XP_002448463.1| hypothetical protein SORBIDRAFT_06g027540 [Sorghum bicolor]
           gi|241939646|gb|EES12791.1| hypothetical protein
           SORBIDRAFT_06g027540 [Sorghum bicolor]
          Length = 271

 Score =  242 bits (618), Expect = 1e-61
 Identities = 134/275 (48%), Positives = 182/275 (66%), Gaps = 5/275 (1%)
 Frame = -2

Query: 962 RDERVLQWGQQETRDFIGIRADLERDFNVSKRN-KSLWEVVSCKMKERGFVRTPDQCKYK 786
           RDERV QWG QETR+ I  R ++ER+   ++R+ K++WE V+ +++ERG+ RT +QCK K
Sbjct: 12  RDERVPQWGAQETRELIMARGEMERETVAARRSAKTMWEAVAARLRERGYRRTAEQCKCK 71

Query: 785 WKNLVMRYKAKETSDME---KCPFFEELHAVFAERADNMQRFHLEPGAGPA-KKRVKRNS 618
           WKNLV RYK KETSD E   +CPFFEELHAVF ERA NMQR  LE  +G + K+++KR  
Sbjct: 72  WKNLVNRYKGKETSDPEIGRQCPFFEELHAVFTERARNMQRQLLESESGASVKRKLKRPG 131

Query: 617 WXXXXXXXXXXXXXXXXXXXEAGRNSNPRKRRGGREKQLSRSTLEKQSPRQPXXXXXXXX 438
                               E   +S  RKR+   +KQ  +   EK              
Sbjct: 132 GDRSSGESDDEDDGGEESDDEKPMHS--RKRKADDKKQQYQRMSEKS------------- 176

Query: 437 XXXXXXSIQDMLREFIQQQQRIDMEWRESMEKRAYERLLFEQEWRQSMEKLERERIMIEQ 258
                 SI ++L++F+ QQQ ID+ W+E ME+RA ER++FEQ+WRQ+M+KLE+ER+++E 
Sbjct: 177 -RAGISSIHELLQDFLVQQQHIDVRWQEMMERRAQERVVFEQQWRQTMQKLEQERLLLEH 235

Query: 257 TWREKEEQRRMRDESRAEKRDALLTSLLNKLIHED 153
           +W E+EEQRRMR+E+RAEKRDALLT+LLNKL+ ED
Sbjct: 236 SWMEREEQRRMREEARAEKRDALLTTLLNKLLQED 270


Top