BLASTX nr result

ID: Cnidium21_contig00029163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029163
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17738.3| unnamed protein product [Vitis vinifera]              354   2e-95
ref|XP_002267910.1| PREDICTED: scarecrow-like protein 3 [Vitis v...   354   2e-95
emb|CAN67001.1| hypothetical protein VITISV_031083 [Vitis vinifera]   348   9e-94
ref|XP_002303907.1| GRAS family transcription factor [Populus tr...   337   3e-90
ref|XP_002299218.1| GRAS family transcription factor [Populus tr...   335   8e-90

>emb|CBI17738.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  354 bits (908), Expect = 2e-95
 Identities = 180/207 (86%), Positives = 191/207 (92%), Gaps = 1/207 (0%)
 Frame = +2

Query: 236 MAGMVLEDGSPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLLTTANHV 412
           MAGM+ EDGS SV SSPLQ FSLMSLSPG+GSPYPWL+E+KSEERGLYLI LL+  ANHV
Sbjct: 1   MAGMIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHV 60

Query: 413 AAGSIENANLGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKRWPGLHKALNSTKISSV 592
           AAGSIENAN+GLE ISHL+SPDGDT+QRIAAYFTEALADRMLK WPGLHKALNSTKISS+
Sbjct: 61  AAGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSI 120

Query: 593 SEERLVQKLFFELCPFLKLSYVITNQAIIEAMEGEKVVHIIDLNSVEPAQWINLLQLFSA 772
           SEE LVQKLFFELCPFLKLSYVITNQAIIEAMEGEK+VHIIDLNS E AQWINLLQ  SA
Sbjct: 121 SEEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFESAQWINLLQSLSA 180

Query: 773 RPEGPPHLRITGIHEQKEVLDEMAHRL 853
           RPEGPPHLRITGIHEQKEVLD MA +L
Sbjct: 181 RPEGPPHLRITGIHEQKEVLDLMALQL 207


>ref|XP_002267910.1| PREDICTED: scarecrow-like protein 3 [Vitis vinifera]
          Length = 478

 Score =  354 bits (908), Expect = 2e-95
 Identities = 180/207 (86%), Positives = 191/207 (92%), Gaps = 1/207 (0%)
 Frame = +2

Query: 236 MAGMVLEDGSPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLLTTANHV 412
           MAGM+ EDGS SV SSPLQ FSLMSLSPG+GSPYPWL+E+KSEERGLYLI LL+  ANHV
Sbjct: 1   MAGMIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHV 60

Query: 413 AAGSIENANLGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKRWPGLHKALNSTKISSV 592
           AAGSIENAN+GLE ISHL+SPDGDT+QRIAAYFTEALADRMLK WPGLHKALNSTKISS+
Sbjct: 61  AAGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSI 120

Query: 593 SEERLVQKLFFELCPFLKLSYVITNQAIIEAMEGEKVVHIIDLNSVEPAQWINLLQLFSA 772
           SEE LVQKLFFELCPFLKLSYVITNQAIIEAMEGEK+VHIIDLNS E AQWINLLQ  SA
Sbjct: 121 SEEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFESAQWINLLQSLSA 180

Query: 773 RPEGPPHLRITGIHEQKEVLDEMAHRL 853
           RPEGPPHLRITGIHEQKEVLD MA +L
Sbjct: 181 RPEGPPHLRITGIHEQKEVLDLMALQL 207


>emb|CAN67001.1| hypothetical protein VITISV_031083 [Vitis vinifera]
          Length = 545

 Score =  348 bits (893), Expect = 9e-94
 Identities = 177/204 (86%), Positives = 188/204 (92%), Gaps = 1/204 (0%)
 Frame = +2

Query: 245 MVLEDGSPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLLTTANHVAAG 421
           M+ EDGS SV SSPLQ FSLMSLSPG+GSPYPWL+E+KSEERGLYLI LL+  ANHVAAG
Sbjct: 1   MIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHVAAG 60

Query: 422 SIENANLGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKRWPGLHKALNSTKISSVSEE 601
           SIENAN+GLE ISHL+SPDGDT+QRIAAYFTEALADRMLK WPGLHKALNSTKISS+SEE
Sbjct: 61  SIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSISEE 120

Query: 602 RLVQKLFFELCPFLKLSYVITNQAIIEAMEGEKVVHIIDLNSVEPAQWINLLQLFSARPE 781
            LVQKLFFELCPFLKLSYVITNQAIIEAMEGEK+VHIIDLNS E AQWINLLQ  SARPE
Sbjct: 121 ILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFESAQWINLLQSLSARPE 180

Query: 782 GPPHLRITGIHEQKEVLDEMAHRL 853
           GPPHLRITGIHEQKEVLD MA +L
Sbjct: 181 GPPHLRITGIHEQKEVLDLMALQL 204


>ref|XP_002303907.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841339|gb|EEE78886.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  337 bits (863), Expect = 3e-90
 Identities = 167/206 (81%), Positives = 183/206 (88%)
 Frame = +2

Query: 236 MAGMVLEDGSPSVSSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLLTTANHVA 415
           MAGMV E+GS SV+SP QFF  M LSPGIGSPYPWLRE+KSEERGL LIHLLL  ANHVA
Sbjct: 1   MAGMVQEEGSSSVTSPPQFFPWMQLSPGIGSPYPWLRELKSEERGLCLIHLLLACANHVA 60

Query: 416 AGSIENANLGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKRWPGLHKALNSTKISSVS 595
            GS+ENAN+ LE ISHL+SPDGDTMQRIAAYFT ALADR+LK WPGLHKALN  ++S +S
Sbjct: 61  VGSVENANISLEHISHLASPDGDTMQRIAAYFTAALADRILKGWPGLHKALNPKQVSLIS 120

Query: 596 EERLVQKLFFELCPFLKLSYVITNQAIIEAMEGEKVVHIIDLNSVEPAQWINLLQLFSAR 775
           EE LVQ+LFFELCPFLKLSYVITN+AIIE+MEGEK+VHIIDLNS EPAQWINLLQ  SAR
Sbjct: 121 EEILVQRLFFELCPFLKLSYVITNEAIIESMEGEKMVHIIDLNSSEPAQWINLLQTLSAR 180

Query: 776 PEGPPHLRITGIHEQKEVLDEMAHRL 853
           PEGPPHLRITGIHE+KEVL +MA RL
Sbjct: 181 PEGPPHLRITGIHEKKEVLGQMALRL 206


>ref|XP_002299218.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846476|gb|EEE84023.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  335 bits (859), Expect = 8e-90
 Identities = 171/207 (82%), Positives = 183/207 (88%), Gaps = 1/207 (0%)
 Frame = +2

Query: 236 MAGMVLEDGSPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLLTTANHV 412
           MAGM  E+GS SV SSPLQFF  M LSPG GSPYPWLRE+KSE+RGL LIHLLL  ANHV
Sbjct: 1   MAGMAQEEGSSSVTSSPLQFFPWMPLSPGTGSPYPWLRELKSEDRGLCLIHLLLACANHV 60

Query: 413 AAGSIENANLGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKRWPGLHKALNSTKISSV 592
           AAGSIENAN+GLEQISHL+SPDGDTMQRIAAYFT  LADR+LK WPGLHKALN  + S +
Sbjct: 61  AAGSIENANIGLEQISHLASPDGDTMQRIAAYFTAGLADRILKGWPGLHKALNPKQASLI 120

Query: 593 SEERLVQKLFFELCPFLKLSYVITNQAIIEAMEGEKVVHIIDLNSVEPAQWINLLQLFSA 772
           SEE LVQ+LFFEL PFLKLSYVITNQAIIEAMEGEK+VHIIDLNS EPAQWINLLQ  SA
Sbjct: 121 SEEILVQRLFFELFPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFEPAQWINLLQTLSA 180

Query: 773 RPEGPPHLRITGIHEQKEVLDEMAHRL 853
           RPEGPPHLRITGIHEQKEVL++MA RL
Sbjct: 181 RPEGPPHLRITGIHEQKEVLEQMALRL 207


Top