BLASTX nr result

ID: Cnidium21_contig00029089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029089
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              160   8e-38
ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_003611359.1| Kinase-like protein [Medicago truncatula] gi...   155   2e-36

>ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  162 bits (409), Expect = 3e-38
 Identities = 68/132 (51%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
 Frame = -1

Query: 397 PVWQQPENICLDIPGDLGSGACGYNSLCRLDVSGRPVCQCAPGYSLVDPDDMHGNCKSNF 218
           P+W QP+NIC       GSG CG+NS+CRL+  GRP+C+C  GYSL+DP D +G+C+ N+
Sbjct: 283 PIWSQPDNICQASSVSAGSGTCGFNSVCRLNSDGRPICECPGGYSLLDPSDQYGSCRPNY 342

Query: 217 SLGCDDNNGQSSGEDLYELLEIKNANWPTSDYERLEPFSEADCRNSCLSDCFCAAVVYGS 38
           +  C+++   +  EDLY+  E+ N +WPTSDY  L+PF+E  CR SCL+DC CA  ++ S
Sbjct: 343 TQSCEEDE-VAPVEDLYDFEELTNTDWPTSDYALLQPFTEEKCRQSCLNDCMCAVAIFRS 401

Query: 37  PG-CWKKKLPLS 5
              CWKKKLPLS
Sbjct: 402 GDMCWKKKLPLS 413


>ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  160 bits (406), Expect = 8e-38
 Identities = 68/130 (52%), Positives = 95/130 (73%)
 Frame = -1

Query: 394 VWQQPENICLDIPGDLGSGACGYNSLCRLDVSGRPVCQCAPGYSLVDPDDMHGNCKSNFS 215
           VW +P++IC+++  DLGSGACGYNS+C L    RP C+C  G+SL+D +D +G+C  +F 
Sbjct: 243 VWSKPDDICVNMGADLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFE 302

Query: 214 LGCDDNNGQSSGEDLYELLEIKNANWPTSDYERLEPFSEADCRNSCLSDCFCAAVVYGSP 35
           L C D +G +S ED Y+ +E+ N +WPTSDYER +P +E +CR SCL+DC C+  ++   
Sbjct: 303 LSCRD-DGLNSTEDQYDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIF-RD 360

Query: 34  GCWKKKLPLS 5
           GCWKKKLPLS
Sbjct: 361 GCWKKKLPLS 370


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  160 bits (406), Expect = 8e-38
 Identities = 68/130 (52%), Positives = 95/130 (73%)
 Frame = -1

Query: 394 VWQQPENICLDIPGDLGSGACGYNSLCRLDVSGRPVCQCAPGYSLVDPDDMHGNCKSNFS 215
           VW +P++IC+++  DLGSGACGYNS+C L    RP C+C  G+SL+D +D +G+C  +F 
Sbjct: 321 VWSKPDDICVNMGADLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFE 380

Query: 214 LGCDDNNGQSSGEDLYELLEIKNANWPTSDYERLEPFSEADCRNSCLSDCFCAAVVYGSP 35
           L C D +G +S ED Y+ +E+ N +WPTSDYER +P +E +CR SCL+DC C+  ++   
Sbjct: 381 LSCRD-DGLNSTEDQYDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIF-RD 438

Query: 34  GCWKKKLPLS 5
           GCWKKKLPLS
Sbjct: 439 GCWKKKLPLS 448


>ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  157 bits (396), Expect = 1e-36
 Identities = 67/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -1

Query: 397 PVWQQPENICLDIPGDLGSGACGYNSLCRLDVSGRPVCQCAPGYSLVDPDDMHGNCKSNF 218
           P+W QP+NIC       GSG CG+NS+CRL+   RP+C+C  GYSL+DP D +G+C+ N+
Sbjct: 283 PIWSQPDNICQASFVSSGSGTCGFNSVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNY 342

Query: 217 SLGCDDNNGQSSGEDLYELLEIKNANWPTSDYERLEPFSEADCRNSCLSDCFCAAVVYGS 38
           +  C+++   +  EDLY+  E+ N +WPTSDY  L+PF+E  CR SCL+DC CA  ++ S
Sbjct: 343 TQSCEEDE-VAPVEDLYDFEELTNTDWPTSDYALLKPFTEEKCRQSCLNDCMCAVAIFRS 401

Query: 37  PG-CWKKKLPLS 5
              CWKKKLPLS
Sbjct: 402 GDMCWKKKLPLS 413


>ref|XP_003611359.1| Kinase-like protein [Medicago truncatula]
           gi|355512694|gb|AES94317.1| Kinase-like protein
           [Medicago truncatula]
          Length = 800

 Score =  155 bits (393), Expect = 2e-36
 Identities = 63/129 (48%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
 Frame = -1

Query: 382 PENICLDIPGDLGSGACGYNSLCRLDVSGRPVCQCAPGYSLVDPDDMHGNCKSNFSLGCD 203
           P+NIC+ I  ++GSG CGYNS C ++ + RP C+C  GYSL+DP +  G C+ NF+LGC 
Sbjct: 290 PDNICIAIFNEMGSGTCGYNSYCSME-NQRPTCKCPYGYSLIDPSNQFGGCQLNFTLGCG 348

Query: 202 DNNGQSSG---EDLYELLEIKNANWPTSDYERLEPFSEADCRNSCLSDCFCAAVVYGSPG 32
           DNNG+      E+LYE   +++ +WP SDYE+++P+S+ DC+ SCL DC CA  V+ +  
Sbjct: 349 DNNGEGLNVKPEELYEFTVLRDVDWPLSDYEKMQPYSQQDCQQSCLHDCMCAVAVFNNNT 408

Query: 31  CWKKKLPLS 5
           CWKK+LP++
Sbjct: 409 CWKKRLPIA 417


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