BLASTX nr result

ID: Cnidium21_contig00029084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029084
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23273.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240...    79   3e-13
ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana] gi...    78   8e-13
ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808...    78   8e-13
ref|XP_002863467.1| structural constituent of ribosome [Arabidop...    78   8e-13

>emb|CBI23273.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/55 (67%), Positives = 41/55 (74%)
 Frame = +2

Query: 2   KGRFRVMNDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYAKVMKKLDFCS 166
           K RFRVMNDG IRRW+EGKRHNAH           QP +VPAAYAKVMKKL+FC+
Sbjct: 91  KMRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKKLNFCA 145


>ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240778 [Vitis vinifera]
          Length = 165

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/55 (67%), Positives = 41/55 (74%)
 Frame = +2

Query: 2   KGRFRVMNDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYAKVMKKLDFCS 166
           K RFRVMNDG IRRW+EGKRHNAH           QP +VPAAYAKVMKKL+FC+
Sbjct: 111 KMRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKKLNFCA 165


>ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana]
           gi|21593524|gb|AAM65491.1| unknown [Arabidopsis
           thaliana] gi|26450411|dbj|BAC42320.1| unknown protein
           [Arabidopsis thaliana] gi|28827502|gb|AAO50595.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007889|gb|AED95272.1| Ribosomal protein L35
           [Arabidopsis thaliana]
          Length = 173

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/55 (63%), Positives = 40/55 (72%)
 Frame = +2

Query: 2   KGRFRVMNDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYAKVMKKLDFCS 166
           K RF+ +NDG IRRWKEGKRHNAH           QPG+VP AYAKVMKKL+FC+
Sbjct: 119 KDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFCN 173


>ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808184 [Glycine max]
          Length = 155

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/53 (69%), Positives = 39/53 (73%)
 Frame = +2

Query: 2   KGRFRVMNDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYAKVMKKLDF 160
           K RFR MNDG IRRWKEGKRHNAH           +PGIVPAAYAKVMKKL+F
Sbjct: 101 KSRFRAMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYAKVMKKLNF 153


>ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297309302|gb|EFH39726.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 170

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/55 (63%), Positives = 40/55 (72%)
 Frame = +2

Query: 2   KGRFRVMNDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYAKVMKKLDFCS 166
           K RF+ +NDG IRRWKEGKRHNAH           QPG+VP AYAKVMKKL+FC+
Sbjct: 116 KDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFCN 170


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