BLASTX nr result

ID: Cnidium21_contig00029075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029075
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298461.1| f-box family protein [Populus trichocarpa] g...   104   8e-21
emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]   102   5e-20
ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...   101   7e-20
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...   101   7e-20
ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|2...   101   9e-20

>ref|XP_002298461.1| f-box family protein [Populus trichocarpa]
           gi|222845719|gb|EEE83266.1| f-box family protein
           [Populus trichocarpa]
          Length = 368

 Score =  104 bits (260), Expect = 8e-21
 Identities = 45/86 (52%), Positives = 55/86 (63%)
 Frame = -3

Query: 305 GWWYGVAGHLEPWERCKIYCQCHRSDKVVSEFNQYDPGSRWRETITRKSNHREISDGVHG 126
           GWWYGV GHLE  +  + YC+CH SD VV EF+QY PGSRWR T   +  HRE  D   G
Sbjct: 282 GWWYGVVGHLELCDGNENYCRCHNSDTVVLEFHQYTPGSRWRSTAVNRKEHREEGDEADG 341

Query: 125 FYGGI*HIYNKYELPMWQQHRPPEAM 48
           FYGGI  +YN  E+  W++  P E +
Sbjct: 342 FYGGIRKLYNNEEISRWKRLWPTEVL 367


>emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]
          Length = 364

 Score =  102 bits (253), Expect = 5e-20
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = -3

Query: 320 MKC--LSGWWYGVAGHLEPWERCKIYCQCHRSDKVVSEFNQYDPGSRWRETITRKSNHRE 147
           M+C  ++GWWYG+ GHLE  +  + YC+CH S+ VV EFNQY PGSRWR T   + +HRE
Sbjct: 271 MRCYDIAGWWYGIVGHLESCDGNESYCRCHNSETVVLEFNQYTPGSRWRRTSINRKDHRE 330

Query: 146 ISDGVHGFYGGI*HIYNKYELPMWQQHRPPEAM 48
             +   GFYGGI  +    E+ +W+Q  P E +
Sbjct: 331 EGNEADGFYGGIRKLCRNDEISVWKQLWPAEVL 363


>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score =  101 bits (252), Expect = 7e-20
 Identities = 45/86 (52%), Positives = 56/86 (65%)
 Frame = -3

Query: 305 GWWYGVAGHLEPWERCKIYCQCHRSDKVVSEFNQYDPGSRWRETITRKSNHREISDGVHG 126
           GWWYGV GHLE  +    +C CH SD VV EFNQY PGSRWR  I  + +HRE  + V G
Sbjct: 282 GWWYGVVGHLETCDGDANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDG 341

Query: 125 FYGGI*HIYNKYELPMWQQHRPPEAM 48
           FYGGI  +Y+  E+ MW+Q  P + +
Sbjct: 342 FYGGIRKLYSNEEISMWKQLWPTDIL 367


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score =  101 bits (252), Expect = 7e-20
 Identities = 45/86 (52%), Positives = 56/86 (65%)
 Frame = -3

Query: 305 GWWYGVAGHLEPWERCKIYCQCHRSDKVVSEFNQYDPGSRWRETITRKSNHREISDGVHG 126
           GWWYGV GHLE  +    +C CH SD VV EFNQY PGSRWR  I  + +HRE  + V G
Sbjct: 310 GWWYGVVGHLETCDGDANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDHREEGNEVDG 369

Query: 125 FYGGI*HIYNKYELPMWQQHRPPEAM 48
           FYGGI  +Y+  E+ MW+Q  P + +
Sbjct: 370 FYGGIRKLYSNEEISMWKQLWPTDIL 395


>ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|222850416|gb|EEE87963.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  101 bits (251), Expect = 9e-20
 Identities = 43/86 (50%), Positives = 54/86 (62%)
 Frame = -3

Query: 305 GWWYGVAGHLEPWERCKIYCQCHRSDKVVSEFNQYDPGSRWRETITRKSNHREISDGVHG 126
           GWWYGV GHLE  +  + YC+CH SD VV EF+QY PGSRWR T   +  HRE  +   G
Sbjct: 319 GWWYGVVGHLESCDGNENYCRCHNSDTVVLEFHQYTPGSRWRSTTVNRKEHREEGNEADG 378

Query: 125 FYGGI*HIYNKYELPMWQQHRPPEAM 48
           FYGGI  +Y   E+  W++  P E +
Sbjct: 379 FYGGIRKLYKNEEISRWKRLWPTEVL 404


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