BLASTX nr result
ID: Cnidium21_contig00029070
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00029070
(1310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi... 547 e-153
ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ... 546 e-153
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi... 546 e-153
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera] 546 e-153
emb|CBI26002.3| unnamed protein product [Vitis vinifera] 541 e-151
>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
gi|449522692|ref|XP_004168360.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
Length = 496
Score = 547 bits (1409), Expect = e-153
Identities = 270/381 (70%), Positives = 311/381 (81%), Gaps = 8/381 (2%)
Frame = -2
Query: 1123 SLHPTRLRLIKCASTA--------TSSSSPVKKRHWKQGEYPAVSQSSVPSRSLXXXXXX 968
S HP R+++CA A ++SSSP KKRHWKQGE+P +++S R+
Sbjct: 36 SSHPNS-RIVRCAFAAPTRKSPVPSTSSSPAKKRHWKQGEFPGTTETSTRRRA------P 88
Query: 967 XXXXXXXXXXXXXXKAWANTVTEALSECIDKKQWVQALEVFEMLKEQPFYQPKEGTYMRL 788
KAWANTVTEALS+ I K+W+QALEVFEML+EQPFY+PKEGTYM+L
Sbjct: 89 LKRVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKL 148
Query: 787 IVLMGKNRQPELARKLFDGMIDEGLEPTAELYTALLGAYCRSNNIDEAMLILEQMKTLPL 608
+VL+G++ QP AR LFD M+ E EPT ELYTALL AYCR+N ID+A L MKTLP
Sbjct: 149 LVLLGRSGQPHRARLLFDTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTLPR 208
Query: 607 CQPDVFTFSILIKACIDATRFELVESLYEQMAERGISPNTVTQNTVLSGYGKAGKFDEME 428
CQPDV+T+SILIKAC+D +RFE+VESLYE+MAER I+PNTVTQN VLSGYGK GK+D+ME
Sbjct: 209 CQPDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQME 268
Query: 427 KVLLGMLESTTCRPDVWTMNTIISVFGNMGDIEMMERWYEKFRNFGIEPETRTFNILIGA 248
KVL+GMLESTTCRPDVWTMN I+SVFGN G IEMMERWYEKFRNFGIEPETRTFNILIGA
Sbjct: 269 KVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGA 328
Query: 247 YGKKRMYDKMSTVMEYMRKLSFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRSEGMKAD 68
YGKKRMYDKMS+VMEYMRKL FPWTTSTYNNVIEAF+DVGDAKNMEYTF+QMR+EGM+AD
Sbjct: 329 YGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRAD 388
Query: 67 TKTFCCLIRGFANAGIFHKVI 5
TKTFCCLI G+ANAG+FHKVI
Sbjct: 389 TKTFCCLINGYANAGLFHKVI 409
Score = 127 bits (320), Expect = 5e-27
Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
Frame = -2
Query: 859 ALEVFEMLKEQPFYQPKEGTYMRLIVLMGKNRQPELARKLFDGMIDEGLEPTAELYTALL 680
A ++K P QP TY LI + + E+ L++ M + + P +L
Sbjct: 196 AFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVL 255
Query: 679 GAYCRSNNIDEAMLILEQMKTLPLCQPDVFTFSILIKACIDATRFELVESLYEQMAERGI 500
Y + D+ +L M C+PDV+T +I++ + E++E YE+ GI
Sbjct: 256 SGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGI 315
Query: 499 SPNTVTQNTVLSGYGKAGKFDEMEKVLLGMLES----TTCRPDVWTMNTIISVFGNMGDI 332
P T T N ++ YGK +D+M V+ M + TT T N +I F ++GD
Sbjct: 316 EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS-----TYNNVIEAFADVGDA 370
Query: 331 EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLSFPWTTSTYNNV 152
+ ME +E+ R G+ +T+TF LI Y ++ K+ ++ KL P TS YN V
Sbjct: 371 KNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEIPENTSFYNAV 430
Query: 151 IEAFSDVGDAKNMEYTFDQMRSEGMKADTKTFCCLIRGFANAGIFHKV 8
I A + D M+ F +M+ + + D KT+ ++ + G+ +V
Sbjct: 431 ISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDRV 478
>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510921|gb|AES92063.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 496
Score = 546 bits (1408), Expect = e-153
Identities = 262/361 (72%), Positives = 305/361 (84%)
Frame = -2
Query: 1084 STATSSSSPVKKRHWKQGEYPAVSQSSVPSRSLXXXXXXXXXXXXXXXXXXXXKAWANTV 905
+ + S+SS VKK+HWKQGE+P VS++S+PS + KAWANTV
Sbjct: 49 TASASNSSVVKKKHWKQGEFPGVSETSLPSST---RRKPIKNVKKKLDRKNNAKAWANTV 105
Query: 904 TEALSECIDKKQWVQALEVFEMLKEQPFYQPKEGTYMRLIVLMGKNRQPELARKLFDGMI 725
TEALSECIDKKQW+QALE +ML+EQ FYQP+EGTYM+LIVL+GK+ QP+ A +LF MI
Sbjct: 106 TEALSECIDKKQWLQALETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMI 165
Query: 724 DEGLEPTAELYTALLGAYCRSNNIDEAMLILEQMKTLPLCQPDVFTFSILIKACIDATRF 545
+EG +PT ELYTALL AYCRSN IDEA+ IL++MK PLCQPDVFT+S LIKAC+D +F
Sbjct: 166 EEGCDPTPELYTALLAAYCRSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKACVDIFKF 225
Query: 544 ELVESLYEQMAERGISPNTVTQNTVLSGYGKAGKFDEMEKVLLGMLESTTCRPDVWTMNT 365
EL+E LYE+MA+R I PNTVTQN VL+GYGKAG FD+MEKVL GML+S C+PDVWTMNT
Sbjct: 226 ELIELLYEEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTMNT 285
Query: 364 IISVFGNMGDIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLS 185
II VFGNMG I+MME+WYEKFRNFGIEPETRTFNILIG+YGKKRMYDKMS+VMEYMRKL
Sbjct: 286 IIGVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQ 345
Query: 184 FPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRSEGMKADTKTFCCLIRGFANAGIFHKVI 5
FPWTTSTYNNVIEAF++ GDAKNMEYTF+QMRSEGM+ADTKTFCCLI+GFANAG+FHKVI
Sbjct: 346 FPWTTSTYNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVI 405
Query: 4 S 2
S
Sbjct: 406 S 406
Score = 62.4 bits (150), Expect = 2e-07
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Frame = -2
Query: 817 QPKEGTYMRLIVLMGKNRQPELARKLFDGMIDEGLEPTAELYTALLGAYCRSNNIDEAML 638
+P T +I + G Q ++ K ++ + G+EP + L+G+Y + D+
Sbjct: 277 KPDVWTMNTIIGVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 336
Query: 637 ILEQMKTLPLCQPDVFTFSILIKACIDATRFELVESLYEQMAERGISPNTVTQNTVLSGY 458
++E M+ L T++ +I+A +A + +E + QM G+ +T T ++ G+
Sbjct: 337 VMEYMRKLQFPWT-TSTYNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGF 395
Query: 457 GKAGKFDEMEKVLLGMLESTTCRPDVWTM--NTIISVFGNMGDIEMMERWYEKFRNFGIE 284
AG F KV+ + + + T N ++S D+ M+R + + ++
Sbjct: 396 ANAGLF---HKVISSVQLAAKLEIPLNTAFYNAVLSACAKAEDLMEMDRVFMRMKDTQCP 452
Query: 283 PETRTFNILIGAYGKKRMYDKM 218
+ T++I++ AY K+ M DK+
Sbjct: 453 LDDTTYSIMVEAYRKEGMNDKI 474
>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 546 bits (1406), Expect = e-153
Identities = 269/371 (72%), Positives = 306/371 (82%)
Frame = -2
Query: 1114 PTRLRLIKCASTATSSSSPVKKRHWKQGEYPAVSQSSVPSRSLXXXXXXXXXXXXXXXXX 935
P R + S+++SSS+ KKR WKQGE+P S ++
Sbjct: 48 PARRKTSSTPSSSSSSSAVGKKRLWKQGEFPGTSAEGRSRKT------PIKNIKKKLDRK 101
Query: 934 XXXKAWANTVTEALSECIDKKQWVQALEVFEMLKEQPFYQPKEGTYMRLIVLMGKNRQPE 755
KAWANTV EALS+ + KKQW+QALEVFEML+EQPFYQPKEGTYM+L+VL+GK+ QP
Sbjct: 102 NDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPL 161
Query: 754 LARKLFDGMIDEGLEPTAELYTALLGAYCRSNNIDEAMLILEQMKTLPLCQPDVFTFSIL 575
A +LFD M++EG EPT ELYTALL +YCRSN IDEA IL QMKTLP CQPDVFT+S L
Sbjct: 162 RAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTL 221
Query: 574 IKACIDATRFELVESLYEQMAERGISPNTVTQNTVLSGYGKAGKFDEMEKVLLGMLESTT 395
+KAC+DA+RFELVESLYE+M R I+PNTVTQN VLSGYGKAGKFDEMEKVL GMLEST+
Sbjct: 222 LKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTS 281
Query: 394 CRPDVWTMNTIISVFGNMGDIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 215
+PDVWTMNTI+S+FGN G IE+ME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS
Sbjct: 282 SKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 341
Query: 214 TVMEYMRKLSFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRSEGMKADTKTFCCLIRGF 35
+VMEYMRKL FPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMR+EGMKADTKTFCCLIRG+
Sbjct: 342 SVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGY 401
Query: 34 ANAGIFHKVIS 2
ANAG+FHKV+S
Sbjct: 402 ANAGLFHKVVS 412
>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 546 bits (1406), Expect = e-153
Identities = 269/371 (72%), Positives = 306/371 (82%)
Frame = -2
Query: 1114 PTRLRLIKCASTATSSSSPVKKRHWKQGEYPAVSQSSVPSRSLXXXXXXXXXXXXXXXXX 935
P R + S+++SSS+ KKR WKQGE+P S ++
Sbjct: 48 PARRKTSSTPSSSSSSSAVGKKRLWKQGEFPGTSAEGRSRKT------PIKNIKKKLDRK 101
Query: 934 XXXKAWANTVTEALSECIDKKQWVQALEVFEMLKEQPFYQPKEGTYMRLIVLMGKNRQPE 755
KAWANTV EALS+ + KKQW+QALEVFEML+EQPFYQPKEGTYM+L+VL+GK+ QP
Sbjct: 102 NDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPL 161
Query: 754 LARKLFDGMIDEGLEPTAELYTALLGAYCRSNNIDEAMLILEQMKTLPLCQPDVFTFSIL 575
A +LFD M++EG EPT ELYTALL +YCRSN IDEA IL QMKTLP CQPDVFT+S L
Sbjct: 162 RAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTL 221
Query: 574 IKACIDATRFELVESLYEQMAERGISPNTVTQNTVLSGYGKAGKFDEMEKVLLGMLESTT 395
+KAC+DA+RFELVESLYE+M R I+PNTVTQN VLSGYGKAGKFDEMEKVL GMLEST+
Sbjct: 222 LKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTS 281
Query: 394 CRPDVWTMNTIISVFGNMGDIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 215
+PDVWTMNTI+S+FGN G IE+ME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS
Sbjct: 282 SKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 341
Query: 214 TVMEYMRKLSFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRSEGMKADTKTFCCLIRGF 35
+VMEYMRKL FPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMR+EGMKADTKTFCCLIRG+
Sbjct: 342 SVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGY 401
Query: 34 ANAGIFHKVIS 2
ANAG+FHKV+S
Sbjct: 402 ANAGLFHKVVS 412
>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 541 bits (1395), Expect = e-151
Identities = 267/368 (72%), Positives = 303/368 (82%)
Frame = -2
Query: 1114 PTRLRLIKCASTATSSSSPVKKRHWKQGEYPAVSQSSVPSRSLXXXXXXXXXXXXXXXXX 935
P R + S+++SSS+ KKR WKQGE+P S ++
Sbjct: 48 PARRKTSSTPSSSSSSSAVGKKRLWKQGEFPGTSAEGRSRKT------PIKNIKKKLDRK 101
Query: 934 XXXKAWANTVTEALSECIDKKQWVQALEVFEMLKEQPFYQPKEGTYMRLIVLMGKNRQPE 755
KAWANTV EALS+ + KKQW+QALEVFEML+EQPFYQPKEGTYM+L+VL+GK+ QP
Sbjct: 102 NDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPL 161
Query: 754 LARKLFDGMIDEGLEPTAELYTALLGAYCRSNNIDEAMLILEQMKTLPLCQPDVFTFSIL 575
A +LFD M++EG EPT ELYTALL +YCRSN IDEA IL QMKTLP CQPDVFT+S L
Sbjct: 162 RAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTL 221
Query: 574 IKACIDATRFELVESLYEQMAERGISPNTVTQNTVLSGYGKAGKFDEMEKVLLGMLESTT 395
+KAC+DA+RFELVESLYE+M R I+PNTVTQN VLSGYGKAGKFDEMEKVL GMLEST+
Sbjct: 222 LKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTS 281
Query: 394 CRPDVWTMNTIISVFGNMGDIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 215
+PDVWTMNTI+S+FGN G IE+ME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS
Sbjct: 282 SKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 341
Query: 214 TVMEYMRKLSFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRSEGMKADTKTFCCLIRGF 35
+VMEYMRKL FPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMR+EGMKADTKTFCCLIRG+
Sbjct: 342 SVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGY 401
Query: 34 ANAGIFHK 11
ANAG+FHK
Sbjct: 402 ANAGLFHK 409