BLASTX nr result

ID: Cnidium21_contig00029027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029027
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45533.1| unknown [Lotus japonicus]                               68   3e-09
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    68   3e-09
ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g...    67   3e-09
ref|XP_002894682.1| hypothetical protein ARALYDRAFT_337885 [Arab...    66   7e-09
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    65   1e-08

>gb|AFK45533.1| unknown [Lotus japonicus]
          Length = 159

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 59/163 (36%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
 Frame = -2

Query: 668 DRISSLPDELIHHILSFSDTQLAVQTSVLSKRWKLVWTTLPFLNFKRPDD--YVINCPQL 495
           DRIS LPDE+++HILSF  TQ+A  TSVLSKRWK +W ++P L F   DD  Y++N    
Sbjct: 4   DRISMLPDEVLYHILSFLPTQIAASTSVLSKRWKPLWLSVPALFF---DDRSYLLNDKPY 60

Query: 494 VNLEINVPGTTIGHPGQIIVSSRKIRNFCSVSFFPIKFKVSKLE---NVNIKFGISEFPV 324
           +     +  T +       V  R  R  C  S F   F VS+L    N  IK G+    +
Sbjct: 61  LYFTKFIYATILTRD----VPIRTFRLQCEDSHF--NFSVSELNIWVNAAIKRGLENLYI 114

Query: 323 TEMLRGLG-SARIFILTLDSRTIEALSAVS----DFLDYSHLP 210
                 L  S+ IF      +T+  L  V     D + ++HLP
Sbjct: 115 RLPRNQLSWSSCIF----SCKTLVVLELVGLEDLDVISFAHLP 153


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/55 (58%), Positives = 43/55 (78%)
 Frame = -2

Query: 698 NEQEEESVGEDRISSLPDELIHHILSFSDTQLAVQTSVLSKRWKLVWTTLPFLNF 534
           N + EES  EDR+S +PD +IHHILSF +T+ A+QT VLSKRW+ +W ++P LNF
Sbjct: 48  NCEMEES--EDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNF 100


>ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g26030-like [Cucumis
           sativus]
          Length = 365

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 35/65 (53%), Positives = 42/65 (64%)
 Frame = -2

Query: 710 LTTRNEQEEESVGEDRISSLPDELIHHILSFSDTQLAVQTSVLSKRWKLVWTTLPFLNFK 531
           +T R   + E   EDRIS LPD L+H ILSF +T+  VQT VLSKRWK +WT +P LNF 
Sbjct: 1   MTIRKSTQTE---EDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFD 57

Query: 530 RPDDY 516
               Y
Sbjct: 58  YNSSY 62


>ref|XP_002894682.1| hypothetical protein ARALYDRAFT_337885 [Arabidopsis lyrata subsp.
           lyrata] gi|297340524|gb|EFH70941.1| hypothetical protein
           ARALYDRAFT_337885 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = -2

Query: 713 RLTTRNEQEEESVGEDRISSLPDELIHHILSFSDTQLAVQTSVLSKRWKLVWTTLPFLNF 534
           R   R    E+   +D ISSLPDE++ HILSFS T+ A++TS+LSKRW+ +W   P L+F
Sbjct: 8   RRRLRRRLHEKKRAKDLISSLPDEILQHILSFSPTKFAIRTSLLSKRWRYIWCDTPSLSF 67


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = -2

Query: 698 NEQEEESVGEDRISSLPDELIHHILSFSDTQLAVQTSVLSKRWKLVWTTLPFLNF 534
           N + EES  +DR+S +PD LIHHILSF +T+ A+QT VLSKRW+ +W ++P L+F
Sbjct: 48  NCEMEES--QDRLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSF 100


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