BLASTX nr result
ID: Cnidium21_contig00029020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00029020
(315 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-34
ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi... 144 6e-33
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago t... 124 1e-26
>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 150 bits (379), Expect = 1e-34
Identities = 71/104 (68%), Positives = 85/104 (81%)
Frame = +3
Query: 3 GFKGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVF 182
GFK HV+V NALINMYAK+G + A KVF++M++RDII+WN++I G+ HHGLGK+AL VF
Sbjct: 365 GFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVF 424
Query: 183 NDMLAAEVKPNSITFIGVLSACGHLGRVQEGFYYLQQLMIQMGI 314
DMLAAE PN +TF GVLSACGHLG VQEGFYYL LM Q G+
Sbjct: 425 QDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGV 468
Score = 67.4 bits (163), Expect = 1e-09
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +3
Query: 3 GFKGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVF 182
GF H VRNAL++MY+K V A V+ E+ DI+++NSI+S +G +E L V
Sbjct: 163 GFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVL 222
Query: 183 NDMLAAEVKPNSITFIGVLSACGHLGRVQEGFY 281
M++ VK + +TF+ S C L ++ G +
Sbjct: 223 RSMVSESVKWDKVTFVNAFSLCASLKDLRLGLH 255
Score = 61.6 bits (148), Expect = 6e-08
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 18 VIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDMLA 197
+I N+LIN YAK V A+ +F M R+++SW+++++GY +G + + + DM++
Sbjct: 66 IIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMIS 125
Query: 198 -AEVKPNSITFIGVLSACGHLGRVQEG 275
V PN +S+C GRV+EG
Sbjct: 126 EGNVSPNEYILAIAISSCCDRGRVEEG 152
Score = 54.3 bits (129), Expect = 1e-05
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +3
Query: 24 VRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDMLAAE 203
V +A+INMY K G A VF + R+++ W ++++ +G +EAL++F+ M
Sbjct: 271 VSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQEN 330
Query: 204 VKPNSITFIGVLSACGHLGRVQEG 275
VK N T+ +L+AC L + G
Sbjct: 331 VKSNEFTYAVLLNACAGLSARRNG 354
>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 144 bits (364), Expect = 6e-33
Identities = 68/99 (68%), Positives = 81/99 (81%)
Frame = +3
Query: 3 GFKGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVF 182
GFK HVIVRNALINMY+K+G + + VFT+MIYRDII+WN++I GY HHGLGK+AL VF
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411
Query: 183 NDMLAAEVKPNSITFIGVLSACGHLGRVQEGFYYLQQLM 299
DM++AE PN +TFIGVLSA HLG V+EGFYYL LM
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLM 450
Score = 73.2 bits (178), Expect = 2e-11
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 15 HVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDML 194
H+ N+L+++Y K G +G A +F M R+++SWN +++GY H G E L +F +M+
Sbjct: 49 HISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMV 108
Query: 195 AAE-VKPNSITFIGVLSACGHLGRVQEG 275
+ + PN F LSAC H GRV+EG
Sbjct: 109 SLQNACPNEYVFTTALSACSHGGRVKEG 136
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +3
Query: 24 VRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDMLAAE 203
V + LI+MY K G V A VF + R+++ W ++++ Y +G +E+L++F M
Sbjct: 258 VGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREG 317
Query: 204 VKPNSITFIGVLSACGHLGRVQEG 275
PN TF +L+AC + ++ G
Sbjct: 318 TLPNEYTFAVLLNACAGIAALRHG 341
>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 140 bits (352), Expect = 1e-31
Identities = 67/104 (64%), Positives = 83/104 (79%)
Frame = +3
Query: 3 GFKGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVF 182
GF+ H+IV NALINMY+K+G + A+KVF EMI RD I+W+++I G HHGLG+EAL VF
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420
Query: 183 NDMLAAEVKPNSITFIGVLSACGHLGRVQEGFYYLQQLMIQMGI 314
+MLAA+ P+ +TF+GVLSAC HLG VQEGFYYL QLM Q GI
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGI 464
Score = 68.6 bits (166), Expect = 5e-10
Identities = 32/91 (35%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +3
Query: 9 KGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFND 188
K +++ N+LIN+YAK + A +F M R+++SW ++++GY H+GL E L +F
Sbjct: 59 KDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKT 118
Query: 189 MLAAE-VKPNSITFIGVLSACGHLGRVQEGF 278
M++ + ++PN F ++S+C G+V EG+
Sbjct: 119 MISVDYMRPNEYIFATIISSCSDSGQVVEGW 149
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +3
Query: 24 VRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDMLAAE 203
V +A+I+MY K G + A KVF + ++++SW +I++ Y +G +EAL+ F +M
Sbjct: 267 VSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDG 326
Query: 204 VKPNSITFIGVLSACGHLGRVQEG 275
+ PN TF +L++C + + G
Sbjct: 327 LLPNEYTFAVLLNSCAGISALGHG 350
>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 132 bits (331), Expect = 4e-29
Identities = 61/99 (61%), Positives = 77/99 (77%)
Frame = +3
Query: 3 GFKGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVF 182
GFK H+IV NALINMY+K+G + + VF+ M+ RD+I+WN++I GY HHGLGK+AL VF
Sbjct: 360 GFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVF 419
Query: 183 NDMLAAEVKPNSITFIGVLSACGHLGRVQEGFYYLQQLM 299
DM++A PN +TFIGVLSAC HL VQEGFYY Q+M
Sbjct: 420 QDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIM 458
Score = 68.6 bits (166), Expect = 5e-10
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 30 NALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDMLAAE-V 206
N+LIN+Y+K G A K+F M+ R+++SW++++ GY H G E L +F ++++ +
Sbjct: 65 NSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSA 124
Query: 207 KPNSITFIGVLSACGHLGRVQEG 275
PN F VLS C GRV+EG
Sbjct: 125 YPNEYIFTIVLSCCADSGRVKEG 147
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +3
Query: 18 VIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDMLA 197
V V + LI+ Y K G V A K F + R++++W ++++ Y +G +E L++F M
Sbjct: 264 VFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMEL 323
Query: 198 AEVKPNSITFIGVLSACGHL 257
+ +PN TF +L+AC L
Sbjct: 324 EDTRPNEFTFAVLLNACASL 343
>ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 700
Score = 124 bits (310), Expect = 1e-26
Identities = 60/99 (60%), Positives = 72/99 (72%)
Frame = +3
Query: 3 GFKGHVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVF 182
G K VIV NALINMY+K G + + VF +M RDII+WN++I GY HGLGK+AL +F
Sbjct: 358 GIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLF 417
Query: 183 NDMLAAEVKPNSITFIGVLSACGHLGRVQEGFYYLQQLM 299
DML+A PN +TF+GVLSAC HL V EGFYYL QLM
Sbjct: 418 QDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLM 456
Score = 73.2 bits (178), Expect = 2e-11
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +3
Query: 15 HVIVRNALINMYAKAGFVGRANKVFTEMIYRDIISWNSIISGYCHHGLGKEALSVFNDML 194
++I N+LIN+Y K + A +F EM R ++S+N ++ GY H G E + +F +M+
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 195 AAEVKPNSITFIGVLSACGHLGRVQEG 275
++ +PN F VLSAC H GRV EG
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEG 140