BLASTX nr result
ID: Cnidium21_contig00029018
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00029018 (411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi... 189 3e-46 ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm... 186 1e-45 gb|AFK48081.1| unknown [Lotus japonicus] 184 5e-45 gb|AFK33567.1| unknown [Lotus japonicus] 184 5e-45 ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife... 183 1e-44 >ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum lycopersicum] Length = 265 Score = 189 bits (479), Expect = 3e-46 Identities = 89/111 (80%), Positives = 97/111 (87%) Frame = +1 Query: 79 RKKLKRLSKTWSDNSHINKLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLR 258 ++K +R+SK +D S IN LDDGCLMHIFSFL PIPDRYNTALVCHRW FLACHPRLWLR Sbjct: 5 KRKWRRISKISTDISLINSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPRLWLR 64 Query: 259 VDRMVKDLSQPGVFPTVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCL 411 VDR VKDLSQPGV+P +E AVSAARPGDTILI AGGSH SNIQI+KPLCL Sbjct: 65 VDRAVKDLSQPGVYPNIEMAVSAARPGDTILIAAGGSHHVSNIQIEKPLCL 115 >ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis] gi|223548087|gb|EEF49579.1| conserved hypothetical protein [Ricinus communis] Length = 250 Score = 186 bits (473), Expect = 1e-45 Identities = 90/115 (78%), Positives = 96/115 (83%), Gaps = 1/115 (0%) Frame = +1 Query: 70 METRKKLK-RLSKTWSDNSHINKLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPR 246 ME +K K + K DN IN LDDGCLMHIFSFL PIPDRYNTALVCHRW FLACHPR Sbjct: 1 MEKAEKGKWKRKKKEGDNCRINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHFLACHPR 60 Query: 247 LWLRVDRMVKDLSQPGVFPTVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCL 411 LWLRVDR +KD SQPGVFP++E AVSAARPGDTILI AGGSH+ASNIQI KPLCL Sbjct: 61 LWLRVDRSIKDTSQPGVFPSIEMAVSAARPGDTILISAGGSHLASNIQINKPLCL 115 >gb|AFK48081.1| unknown [Lotus japonicus] Length = 152 Score = 184 bits (468), Expect = 5e-45 Identities = 86/104 (82%), Positives = 92/104 (88%) Frame = +1 Query: 100 SKTWSDNSHINKLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLRVDRMVKD 279 S + S +SHIN LDDGCLMHIFSFL PIPDR+NTALVCHRW +LACHPRLWLRVDR VKD Sbjct: 28 SSSSSSSSHINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLRVDRSVKD 87 Query: 280 LSQPGVFPTVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCL 411 LSQPGVFP +E AVSA+RPGDTILI AGGSH SNIQIKKPLCL Sbjct: 88 LSQPGVFPNIETAVSASRPGDTILIAAGGSHHTSNIQIKKPLCL 131 >gb|AFK33567.1| unknown [Lotus japonicus] Length = 268 Score = 184 bits (468), Expect = 5e-45 Identities = 86/104 (82%), Positives = 92/104 (88%) Frame = +1 Query: 100 SKTWSDNSHINKLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLACHPRLWLRVDRMVKD 279 S + S +SHIN LDDGCLMHIFSFL PIPDR+NTALVCHRW +LACHPRLWLRVDR VKD Sbjct: 28 SSSSSSSSHINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLRVDRSVKD 87 Query: 280 LSQPGVFPTVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCL 411 LSQPGVFP +E AVSA+RPGDTILI AGGSH SNIQIKKPLCL Sbjct: 88 LSQPGVFPNIETAVSASRPGDTILIAAGGSHHTSNIQIKKPLCL 131 >ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera] gi|297742690|emb|CBI35143.3| unnamed protein product [Vitis vinifera] Length = 254 Score = 183 bits (464), Expect = 1e-44 Identities = 91/119 (76%), Positives = 101/119 (84%), Gaps = 5/119 (4%) Frame = +1 Query: 70 METRKKLK-RLSKTWS----DNSHINKLDDGCLMHIFSFLLPIPDRYNTALVCHRWMFLA 234 ME ++K K R S T S ++S I+ LDDGCLMHIFSFL PIPDRYNTALVCHRW +LA Sbjct: 1 MEEKRKWKHRKSSTSSIPNSNSSSIHNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHYLA 60 Query: 235 CHPRLWLRVDRMVKDLSQPGVFPTVEAAVSAARPGDTILIGAGGSHIASNIQIKKPLCL 411 CHPRLWLRVDR VKD S+PGVFP++E AVSAARPGDTILI AGGSH+ASNIQIKKPLCL Sbjct: 61 CHPRLWLRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASNIQIKKPLCL 119