BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029017
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   164   2e-38
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   153   4e-35
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]   143   3e-32
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...   126   4e-27
ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26

>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  164 bits (415), Expect = 2e-38
 Identities = 82/160 (51%), Positives = 104/160 (65%), Gaps = 1/160 (0%)
 Frame = +3

Query: 213 NEDNTFRGGGGVSKDDYFATVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCC 392
           N ++   G    SKDDYFA +HHIS++VRRD YMERTLNK+ IS + NSELV+RVLR C 
Sbjct: 25  NSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNL-NSELVFRVLRACS 83

Query: 393 HNGAESFRFFNWVRTQHPQYDPXXXXXXXXXXXXARTRCWETMWKVAQQMKTQDXXXXXX 572
           ++G ESFRFFNW  + +P Y P            ARTR + TMWKV  QMKTQ+      
Sbjct: 84  NSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPE 143

Query: 573 XXXXXXEQYGKHGLVDQAVELFNRL-KNFNCPQTTEIYNS 689
                 ++YGK GLVD AV +FN+  K+ +CPQT E+YN+
Sbjct: 144 TISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNA 183


>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  153 bits (386), Expect = 4e-35
 Identities = 92/197 (46%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
 Frame = +3

Query: 102 MLLRARLYFYERILNVTKSNAVLYRSFGTSVKPVLKDNEDNTFRGGGGVSKDDYFATVHH 281
           M  RAR  F+  I N   S  + +    T++   L+    NT        KDDYFA VHH
Sbjct: 1   MFNRARPIFHLLIRNSPASPILTHLKTLTTITTHLQ----NTITS----KKDDYFAVVHH 52

Query: 282 ISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGAESFRFFNWVRTQHPQYDPX 461
           IS +VRRD Y+ERTLNK+ IS  V S+LVYRVLR+C ++G ES RFFNW R+ H  Y P 
Sbjct: 53  ISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS-HLSYQPT 109

Query: 462 XXXXXXXXXXXARTRCWETMWKVAQQMKTQDXXXXXXXXXXXXEQYGKHGLVDQAVELFN 641
                      ART+ ++ MWK+A QM+T              E++GKHGLVDQAVE+FN
Sbjct: 110 TLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFGKHGLVDQAVEVFN 165

Query: 642 RLKN-FNCPQTTEIYNS 689
           + K+  NCPQT E+YNS
Sbjct: 166 KAKSALNCPQTIEVYNS 182


>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
          Length = 356

 Score =  143 bits (361), Expect = 3e-32
 Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
 Frame = +3

Query: 264 FATVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGAESFRFFNWVRTQH 443
           FA VHHIS +VRRD Y+ERTLNK+ IS  V S+LVYRVLR+C ++G ES RFFNW R+ H
Sbjct: 4   FAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS-H 60

Query: 444 PQYDPXXXXXXXXXXXXARTRCWETMWKVAQQMKTQDXXXXXXXXXXXXEQYGKHGLVDQ 623
             Y P            ART+ ++ MWK+A QM+T              E++GKHGLVDQ
Sbjct: 61  XSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFGKHGLVDQ 116

Query: 624 AVELFNRLKN-FNCPQTTEIYNS 689
           AVE+FN+ K+  NCPQT E+YNS
Sbjct: 117 AVEVFNKAKSALNCPQTIEVYNS 139


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score =  126 bits (317), Expect = 4e-27
 Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
 Frame = +3

Query: 249 SKDDYFATVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGAESFRFFNW 428
           +KD YFA +HHI+N+VRRD Y ERTLNK  ++  V SELV+RVLR C  +  ES RFFNW
Sbjct: 36  TKDAYFALIHHITNIVRRDFYPERTLNK--LNAPVTSELVFRVLRACSRSPTESLRFFNW 93

Query: 429 VRTQHPQYDPXXXXXXXXXXXXARTRCWETMWKVAQQMKTQD--XXXXXXXXXXXXEQYG 602
            R     Y P            A+++ + +MWK+  QMK Q+              E+YG
Sbjct: 94  SRA---YYTPTSIEYEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYG 150

Query: 603 KHGLVDQAVELFNRLKNFNCPQTTEIYNS 689
           + GL+DQAVE+FN+  + NC Q  +IYNS
Sbjct: 151 RSGLIDQAVEVFNQCNSLNCEQNVDIYNS 179


>ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Glycine max]
          Length = 450

 Score =  122 bits (307), Expect = 5e-26
 Identities = 65/149 (43%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
 Frame = +3

Query: 249 SKDDYFATVHHISNVVRRDIYMERTLNKMCISRIVNSELVYRVLRNCCHNGAESFRFFNW 428
           S+D+YFA +HH+SN+VRRD Y+ERTLNK+ I+  V  ELV+RVLR C +N  ES RFFNW
Sbjct: 34  SRDEYFAVIHHVSNIVRRDFYLERTLNKLRIT--VTPELVFRVLRACSNNPTESLRFFNW 91

Query: 429 VRTQHPQYDPXXXXXXXXXXXXARTRCWETMWKVAQQMKTQD-XXXXXXXXXXXXEQYGK 605
            RT HP Y P            AR   +++MW + +Q+                 E YG 
Sbjct: 92  ART-HPSYSPTSLEFEQIVTTLARANTYQSMWALIRQVTLHHRLSLSPSAVASVIEAYGD 150

Query: 606 HGLVDQAVELFNRLK-NFNCPQTTEIYNS 689
           +  VDQ+V++FN+     NCPQT  +YN+
Sbjct: 151 NRHVDQSVQVFNKSPLLLNCPQTLPLYNA 179